| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0275 |
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| Symbol | |
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| ID | 4663646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 337774 |
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| End bp | 339666 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639818472 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_965726 |
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| Protein GI | 120601326 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2703] Hemerythrin
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR02481] hemerythrin-like metal-binding domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0339591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCCT CTCCGACCCG ATGCGGTCGG ACACCCCCCG GGGGAAGGGG CGTGTGGTTG
CTTTGCGCCA CCATCTTCTA TTGGGCAGTG GCGCGCTTCG GTATGGCCCT GTTCAGCCTT
GCACCGGAGA ACATCACGCC TCTCTGGCTC GCCTCCGGGG TGGGACTCAT CATGTGTCTT
GAGGCGGGAC TGTCAGCCGT ACCGTGCATC GCGCTGGCGA GTGCCGTGGC CAACTTTCCC
GGACTCTCGG CGTCCGGGGG GGAGTCGCCC CTGCTCTATG CCGTCTTGAC CGGTACGGCG
GATGGACTCT CCGCCGGTTT GCTTGCCGCG CTGGGCAGCC GGGTGCTGCA AGGTGGCATC
ACCAGTGTGC TTGACCTGCT TCGGGGCGTC GTACTGGTGT GCCTGCCTGC CACGCTGATT
GGTGGTGTCG CCATCACCCT GTGTCTGTTC ACCGGAGGCT ATGTGCCTCG TGACGTCCTG
TGCCAGATGT CGTTTTCGCT GATGGCTGGC GACACGCTGG GCGTATTGCT GGTGTTCCCC
CTCTGGCGGG CGTGGCATGT GCTGCCACTA CCTTCCCGTA CAGAACTCTG CTGGATGGCC
GGAGTGCTGT GCCTGTGCCT GCTGTCCATA TGGAGCGCGT TCTTCGTGGA GGGCGCGGCC
ATTCACATGC TCATGCCGCT TCTCGTGCTT TTGTCCTGCA ATGTCCGCAT CAATGGCGTC
ATGGTGGTTC TGTTCCTCAC GGTCATTGCC GTCTTCATCG CCACGGCGCA CAGAGTGGGC
CCCTTTCATA TGCCGACCCA GGGCGAGGCC GTCATGCTGC TGGTGTCGTT CGCTGCCAGC
ACCACGCTCA CAACGCTGGG GCTGTCACTG TACAGACACC TGCTGGCACA GGCGGGCGCA
AGGGCGACGA TGTGGGAACA GCGGGCCGGA ATCGACCCGC TGACGGGGCT GTGCAACCGG
GCGCGCTTCG ATGAGGTCCT TCTGGCAGAA TTGCAGCGTC TGCAACGTCA GGATTCACCC
CTTTCGCTGA TGATGTTCGA TGCCGACCAC TTCAAGCCTT ACAATGACAT GTACGGGCAT
GTCGCAGGTG ATGCATGTCT GAAACGCGTC GCCGGTGTCC TGCGTGCGGT CGCACACCGT
GCGTCGGATG TCGTGGCCCG TTACGGGGGG GAGGAGTTCG TCTGCATCCT GCCTGGAACG
GATAGGGATA GTGCCTATGC GCTTGCCGAA AAGGTGCGTC AGGGGGTTCG GGCGCTTGCC
ATCCCGCATG TGGGGTCGCC GGTGGCGGGG GTGCTGACGG TGAGCGCGGG GGTGGTAACT
GTTCACGGAT GCGACGGGCT TGACCCGCAA GAGGTGGTCG CGCAGGTCGA CCGAGCACTG
TATCAGGCCA AGGGGGCGGG GCGTGACAGG GTCATGGTGG CAAGGGGTGC GGCGAAAGAG
GGCATGCGGA ACGGTGAGTG CGCCTTGTCA GGCGTGCAGC GCCTTGTGTG GAGCGAATAC
TACGCGTGCG GGGAACCACG CATCGATGCG AGTCACAGGG CTTTGCTCGC GAAGGCGGAT
TCGATCATGA GCTCGCTTGG CGGTGCTGAC GGGTTGAACG CCCGGCGGGC GTGCATCCTG
GCGCTGGTTG ATGCGGTACG TATGCATTTC AGGGAGGAGG AGAGGGTGTT GGCTGCCATC
GGCTACCCGA AAGCCGGGGA ACATGCCGTC ATCCATGAGG CACTGCTTCA AAGGGGCGCT
TCTCTCGTCG CGGCATGGGA GAGAGGAGGC ATGTCCCTTG ATGACGTGGT CATCACGCTG
GTTCACGGCA TGGTCATGCG GCATATGCTG GACGATGACA GCGCCTTCTT TGAGCACGTG
CAGCAGTGGA GGGCGGGAGG AACGCAACCC TGA
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| Protein sequence | MSASPTRCGR TPPGGRGVWL LCATIFYWAV ARFGMALFSL APENITPLWL ASGVGLIMCL
EAGLSAVPCI ALASAVANFP GLSASGGESP LLYAVLTGTA DGLSAGLLAA LGSRVLQGGI
TSVLDLLRGV VLVCLPATLI GGVAITLCLF TGGYVPRDVL CQMSFSLMAG DTLGVLLVFP
LWRAWHVLPL PSRTELCWMA GVLCLCLLSI WSAFFVEGAA IHMLMPLLVL LSCNVRINGV
MVVLFLTVIA VFIATAHRVG PFHMPTQGEA VMLLVSFAAS TTLTTLGLSL YRHLLAQAGA
RATMWEQRAG IDPLTGLCNR ARFDEVLLAE LQRLQRQDSP LSLMMFDADH FKPYNDMYGH
VAGDACLKRV AGVLRAVAHR ASDVVARYGG EEFVCILPGT DRDSAYALAE KVRQGVRALA
IPHVGSPVAG VLTVSAGVVT VHGCDGLDPQ EVVAQVDRAL YQAKGAGRDR VMVARGAAKE
GMRNGECALS GVQRLVWSEY YACGEPRIDA SHRALLAKAD SIMSSLGGAD GLNARRACIL
ALVDAVRMHF REEERVLAAI GYPKAGEHAV IHEALLQRGA SLVAAWERGG MSLDDVVITL
VHGMVMRHML DDDSAFFEHV QQWRAGGTQP
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