Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0274 |
Symbol | |
ID | 4663630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 335655 |
End bp | 337424 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639818471 |
Product | cytochrome c, class I |
Protein accession | YP_965725 |
Protein GI | 120601325 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0339591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGTTCG CCCGTCCAGC GACGCGGCGG CACGATCGCG ACACGATCTC CCCCTTGCGG AGAGCCACGC GGCCTGCAGC CCTTCTCACC GCCCTAGTCT CACTTGTGCT TCTCATGTTC ATGACCACAG AGGCGCCCAC GGCAGCGCCC CACGCACCAC GGAAAGCTCC CGACAAGGGC ATGCTCACCA AGGGGGCGAC CCTCTTCAGG CAGCATTGCG GCGGCTGTCA TACGGCCGGA ACCACCGGGA ACGACATCAT GCCGCTCACG CGCCATCTCA CCGTCATGGG ACTTGAGGCG TATATCGACG GACAGGGCAT CATCTTCGAA CACATGCCAC GGTTTGACGG CACCCCCGAA GACCGCGACG CCATCGCGGC ATGGGTGATG GTCACGCTGC ATGGCAAACC CTATGCGGAC CCGCCGTCAG CGAAGCTGCC GCAACTCCCC TTCGCCATCC CCGCTTTCGA CATGCAGAAG GACGAGTACG TACTTCTGAC GTGGAACACC CTTGGCATGA AGTGCATCAC CGACTGTGAC GCGGCCTATT CCTACCTGCC CCCCGGCAAC GCACTGGGGG CCGTGCTCAT CAAGCGCGGC GAGAAACCGG AAATGGTGAC CGAAGGCGTA CGCCTTACCT ATGAGGCCCC CGAAGGGTTC CGATTCCCGT CACGACACAC GGAGTACTGG AAGTATTCCG CATCGATATC AGGGCGTCAG CTACCCGCTG ACACATCCAC GACCGGCAGG GGCATGGACG GAACGCTCGA CTTCAACCCG AAGTCGGCCA CCTTCGAAGC CGCAGGCATC CCCGTGGTGC CGTACAGCGA CGACGGGACC ATCAACCCGT ACCCGCTGTT CAGCGTGAAG GCCGTGGACA GGGTCACCGG CAAGCAACTC GCCCGCACAG AGGTGGTCGT GCCCGTCGGC ACGGAGATGA GCTGCTGGCG TTGCCATGGC GGCGGATGGG CGCGCCCGGA GGGCACAGGC GTTTCTCTCA CCACGGCACG TTCCATCCTC ACCGTGCATG ACAAGCGTTC CGGCACCGAC CTCGTGGCCC GTGCCGATGC GGGCAAACCC GTGCTGTGTC AGAGTTGCCA CCCCGACCCG CTGCTCAACG CCAAGGGCGA CCCGGCACGC CTCAACCTTC CGGCGGCCCT GCACGGCTTC CACGTCAACT ATCTCAAAGG CCGCGGGGCC GAGGTGTGCG CCAACTGCCA CCCCGACAGC AACGCCGGGT TCACGCGCTG CCTGAGGGAC AGTCACGGCA AGGCGGGGCA GACCTGCGTG TCGTGCCACG GCTACCTCGA AGACCATGCC CTCTCGCTGC TCAAGAAGGA GGCCGAACTT GGCAAGACGC GCACGGCACT GTTCATGCGC AACGTCAAGC CGCGCCTCGT CGACAGCGTC GACGCCATCA ATGCCAGAAC CCCGTGGGCA CAGCAGCCCG ACTGCCTCAC CTGCCACAAG GAAGCTTACG AACGTCCCGC CAAGACTGCT TCGGCCTTCA ACGTCTGGAC CAAGGACGGG TCGGGTCTCT ACAGGGCACG CAAGGAGATG ACGGGCAAGG TCCCCTGCAT CGCCTGCCAT AACAGCCCCC ACGCGACGCA CCCCTCCGAC AACCCCTTCG GGCGCGACCG CGACGCCGTG CAGGTACTGC AATACCAGAA GCTCAACGCC GCCATAGGCG CCAAGGGCAA CTGCAAGGTC TGCCACGGCC CCGCCACCAA GCTCACTCCT GACATGTCGC CCCATCACCC CATGCGCTGA
|
Protein sequence | MLFARPATRR HDRDTISPLR RATRPAALLT ALVSLVLLMF MTTEAPTAAP HAPRKAPDKG MLTKGATLFR QHCGGCHTAG TTGNDIMPLT RHLTVMGLEA YIDGQGIIFE HMPRFDGTPE DRDAIAAWVM VTLHGKPYAD PPSAKLPQLP FAIPAFDMQK DEYVLLTWNT LGMKCITDCD AAYSYLPPGN ALGAVLIKRG EKPEMVTEGV RLTYEAPEGF RFPSRHTEYW KYSASISGRQ LPADTSTTGR GMDGTLDFNP KSATFEAAGI PVVPYSDDGT INPYPLFSVK AVDRVTGKQL ARTEVVVPVG TEMSCWRCHG GGWARPEGTG VSLTTARSIL TVHDKRSGTD LVARADAGKP VLCQSCHPDP LLNAKGDPAR LNLPAALHGF HVNYLKGRGA EVCANCHPDS NAGFTRCLRD SHGKAGQTCV SCHGYLEDHA LSLLKKEAEL GKTRTALFMR NVKPRLVDSV DAINARTPWA QQPDCLTCHK EAYERPAKTA SAFNVWTKDG SGLYRARKEM TGKVPCIACH NSPHATHPSD NPFGRDRDAV QVLQYQKLNA AIGAKGNCKV CHGPATKLTP DMSPHHPMR
|
| |