Gene Dvul_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0262 
Symbol 
ID4663217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp321421 
End bp322551 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID639818459 
ProductSerine--pyruvate transaminase 
Protein accessionYP_965713 
Protein GI120601313 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACAC AGGAGGGCCC CTTGGGGCAT CCGTTACGGA ATATCAAGGC ATTGCTGTTG 
ATGGGGGACG GCCCGTCCGG CGTGCCCGAC AGTGTGTATA GTGCGCTTGC ACTCCCCACG
GTGGGGCCGC TCGACCCCGG TTTCGATGAA ATCCTCGACA GGCTTCAAGG GCAGTTGCGG
AACATCTTCA ATGTGTCGGA CGGCGTTTGC GCGGTTCTTG ACGGGCCCGC TGCCGTGGGG
ATGGAGACAT GCCTCGTCAA TCTTCTTGAA CCGGGCGAGC GTCTTCTTGT GCTCGACAAC
GGCATGGGAG GTGAACGACT GCGGGAAACG GCGCAGCGGT TGGGCCTTGC CGTCGATGTG
CTGACCGTGC CGTGGGGTGA CCCCGTTCTC TCTGAACAGG TCGCACAACG GCTTGCCCGC
AGCGATTACC ACGCCGTGGT CATGGTACAT GCCGAATCCT CGACAGGCGT GCGAAGTCCG
GTCGGTGCCG TGGGCGACCT TGTGTCCATG CACGGCGCCC TGTTCATCGT CGATTGCGAG
ACCAGCCTCG GGGGGATGGA TGTGGATATG GCACGGTGGC GTGCCGATGC CCTCTTCGCG
TCGTCGCACA AGTGCCTGTC GTGCCCGCCG GGGCTTGCCC CCGTGGCCTT CTCCATGCGG
GCGCTGGACA GGGTTGGCAG ACGGCGTACT CCAATCCCCG GACGTTATTT CGATATAGCC
CTGCATCTGG ACTATTGGCA GGGCGCGCCG CGCGTCTGTC ACCTCATGCC TTCGGTGAAT
CTGCTCTATG CCTTGCACAT GGCACTGGAG GGCGTGCTCA ACGAGGGGTT GCCCAACGTG
TTCGCCCGCC ATCGCGCTGC GCATGAGCAG CTTGTGACCG GACTTGCTGC GTTGGGTCTG
CGACCGTTGG CGGATGTGCC ATGGCGGTTG CCCATGCTGC ATGTGGTGCC AGCCCCGGAA
GGGGTGGACG CGGAAGATGT GCGGGGCAGG CTTAGGGCTG AACATGGCAT CGAGATTGGC
GGCGGGGTGG GACGTCTTGC CGGACGGGTC TGGCGCTTCG GTCTCATGGG GCACTCGGCC
CGGACGACCA ATGTCGTGGC ATTGCTGGAG GCCCTTGGGC GGCTGCTGTA G
 
Protein sequence
MRTQEGPLGH PLRNIKALLL MGDGPSGVPD SVYSALALPT VGPLDPGFDE ILDRLQGQLR 
NIFNVSDGVC AVLDGPAAVG METCLVNLLE PGERLLVLDN GMGGERLRET AQRLGLAVDV
LTVPWGDPVL SEQVAQRLAR SDYHAVVMVH AESSTGVRSP VGAVGDLVSM HGALFIVDCE
TSLGGMDVDM ARWRADALFA SSHKCLSCPP GLAPVAFSMR ALDRVGRRRT PIPGRYFDIA
LHLDYWQGAP RVCHLMPSVN LLYALHMALE GVLNEGLPNV FARHRAAHEQ LVTGLAALGL
RPLADVPWRL PMLHVVPAPE GVDAEDVRGR LRAEHGIEIG GGVGRLAGRV WRFGLMGHSA
RTTNVVALLE ALGRLL