Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0244 |
Symbol | |
ID | 4662924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 300445 |
End bp | 302181 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639818440 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_965695 |
Protein GI | 120601295 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.16116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCAA AGGCGCAACA GGGAGGAGGG GCCATGCATG AGACCGACCC GCGTTTTCTT CGCGGCATCA TCGACACCCT GAACGAGGGG CTGGTCTTCG TCGGACCCGA CGGACGCATC CGCATGGTGA ATCCGGCGCT GGAGCGGCTG ACGGGCTTCA CCCGTGATGA ACTGGTGGGA CGCGCGTGTT CCGTGCTGCA ATGTGATGCC TGTGTCCGGC AACGCAAGGA TGGCGGGGCG CACTGGTGCC GCCTTTTCGA CCGCAAGGGC GAGAACCGCA AGCGGTGCAC TGTGCGCCGC AAGGACGGTA CGGTGGTTCC CGTGCTCAAG AACGCCCGCG TGCTCACCGA TGGACAGGGA GGCGTGCAGG GTGCCGTGGA GATCATCACC GACCTTTCCG AACTGGTGGA CAAGGAGCGC CGTATCGAAG AGCTTTCGCG CCTTCTCGGG TCGGAGGAGG GCTTCGCGGG CATGGTCGGT GCGTCCTCAG CCATGCATCG TACCTTCAGG TTGCTTGAAC GTGCCGCAGA GAGCGATGCC CCGGTGTTGT TGCTGGGGGC GTCTGGCACG GGCAAGGAAC TGGCTGCGCG GGCGGTGCAC GACCTGGGCA GGCGACGCAA CGGCCCCTAT GTGCAACTCA ACTGTGCGGC CCTAAACGAG AATCTGCTTG AAAGCGAGTT GTTCGGTCAC GTGCGCGGGG CCTTCACCGG TGCTGTACGC GACAGGCAGG GACGGTTCGA GGCAGCCCAT GGCGGAGACC TCTTCCTCGA CGAGATAGGC GACCTGCCCC TGCCGACGCA GGTGAAGCTG TTGCGCGTGC TTGAGACCAA ACGCATCGAG AGGGTGGGCG ACAATCACCC CCGTGAGGTG GACGTGCGCA TCATCGCCGC CACCAACAGG AATCTCGGCG CGCTCGTGCG CGCGGGGCGT TTCCGTGAAG ACCTGCTGTT TCGCATCAAC GTCATTCCGG TCACGCTGCC TGCGCTGGCT GCACGGCGTG AAGACATTCC CCTGCTGGCG GCCTTCTTCC TGCGTGCCAT CACCGAACGT GACGGTCGCA AGGCTGGAGG GCTGACGCCG GCGGCCCTGC GGCATCTGGT GGCCTATACA TGGCCGGGAA ACGTGCGCGA ATTGCGTAGC GCCATGGAGT ATGCCTGTGT GGTGGCGGGC GGAGGTGACA TCGACGCGGA ACATCTCCCG CCGCACATCA TCGACGGGAC GCCGGAATGC GGGGGGCATG CGCTGGCTGC CACCGTGGCC GAAAGGACAG GGCCGGATGC CGCACAGGAG GCCCCTGCGG ATGAGGTGCG CCCTGATGCC CCAGTGCGTG TTGCCGGGCC CGGTGCCGGT GGGGGCACGC AGGGTCGGGC CGGTGAAGTC GGTGCTGTTG CCGCGATACC TGTCGTGTCC GCTGTGCCCG TGGTGCCCGC TGTGCCTGTT GTGACCGACT CCGGCCCCGA CCATGAGATG ATGTCGGTGG ACGCCCATGA CCGCGTGATG TCACTGCCCG GCACTTCCGG CGAGGCTGGC ACGCCGCCGC CCGCCATGGC GGACACCTTC CCGCCAACGC AACGCGAATT GCGCGAAGGA GAGGAGCGAA GGCAGCTTCT TGCGGCGTTG CGTCGTGCAC GCGGCAATAT CTCCGAGGCG GCGCGCCTGC TTGGGGTATA CCGGGGGACG GTACGTAACC GCATGGCGCG TTACGGCATC GACCTTCACC GCGAGGTGAA AGGATGA
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Protein sequence | MDAKAQQGGG AMHETDPRFL RGIIDTLNEG LVFVGPDGRI RMVNPALERL TGFTRDELVG RACSVLQCDA CVRQRKDGGA HWCRLFDRKG ENRKRCTVRR KDGTVVPVLK NARVLTDGQG GVQGAVEIIT DLSELVDKER RIEELSRLLG SEEGFAGMVG ASSAMHRTFR LLERAAESDA PVLLLGASGT GKELAARAVH DLGRRRNGPY VQLNCAALNE NLLESELFGH VRGAFTGAVR DRQGRFEAAH GGDLFLDEIG DLPLPTQVKL LRVLETKRIE RVGDNHPREV DVRIIAATNR NLGALVRAGR FREDLLFRIN VIPVTLPALA ARREDIPLLA AFFLRAITER DGRKAGGLTP AALRHLVAYT WPGNVRELRS AMEYACVVAG GGDIDAEHLP PHIIDGTPEC GGHALAATVA ERTGPDAAQE APADEVRPDA PVRVAGPGAG GGTQGRAGEV GAVAAIPVVS AVPVVPAVPV VTDSGPDHEM MSVDAHDRVM SLPGTSGEAG TPPPAMADTF PPTQRELREG EERRQLLAAL RRARGNISEA ARLLGVYRGT VRNRMARYGI DLHREVKG
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