| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0243 |
|---|
| Symbol | |
|---|
| ID | 4662634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 298586 |
|---|
| End bp | 300175 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639818439 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_965694 |
|---|
| Protein GI | 120601294 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.312499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCAT CTACAGCAGT CCGCGGCAAG CGCATCTCGC GCCGCCGCTT CCTTGGCGGT
CTTGGCATCG CCGGAACGGC CCTCGCCCTC CCCGCAGGCG CACGGGCGGA CGTTCCGGCG
ATGCCGGGCG CGTCATCCGG CAAGACGCCC ACGGTCTACG CCACCCTCTA TGACCTCGAC
CGCTGCGTCG GTTGCGGTGC GTGCGTCGAG GCATGCCATG AGCGCAACGG CGCGCGCTAC
CCCGAACCGA TAAAGCCCTT CCCCGACCTC GTCCCCGCCG GGACGAAGAA CGAAGACTGG
TCGGACAGGC GCGACGTGGA CGACAGGCTC ACGCCGTACA ACTGGCTGTA CATCCAGTCC
GCCACCGTCG ATACGCCGGA AGGCCCGCGC GAGATGCACG TGCCCCGGCG CTGCCTGCAC
TGCGCCAACC CGCCCTGCGC CAACCTGTGC CCGTGGGGGT CGGCACGGCG CGAGACCTCC
GGTGCCGTGA GTATCGAGGC CTCCACCTGT CTTGGAGGGG CCAAATGCCG CACAGTATGC
CCCTGGCACA TTCCGCAGCG GCAATCGGGG GTGGGTCTGT ACCTCGACCT CATGCCACGC
TTCGCAGGCA ATGGCGTCAT GTACAAATGC GACCGCTGCG CCGACATCAC CGCCCGCGGC
GGCATACCCG CCTGTATCGA AGCCTGCCCC TACGACGTAC AGACCATCGG CCCCCGTGAC
GCCATCATCG CCGAAGCGAA GCGACTTGCC GCCGAAAGGG GCTGGCACCT CTACGGGCTT
GACGACAACG GCGGCACCAA CACCATCTAT CTCTCACCCG TGCCCTTCGG GCTGCTGGAC
GCTGCCATCC CCAAGGGGCC GGGCAGGCCG CACCTCGCCC CCGTGGCGGA TGCCATGCGC
GACGAGACCC GCCTTGCCGC CGTGGCTGCC ACCGCGCCCC TGGCCGGATT CGGTGCCGCC
ATGCTGCGTG TAGCCGCCGA CATACGCGAA GCGGCCCATA ACGACGCACC CGGCGCACAT
TCTTCACACG CCATGGGGAA GCCCGGACGG GCTGCAGCCC ATCGTCTGTC AGCCCCCACC
GCAATAGACA CCATCACGCC CCATGCCTTT CTCCACCCTG CCACGTCCCG CGCCGTCCGC
GCCATCTGGC TTGCGTGCGC CATCGTGCTG GGATTCACGG GGCTGATGCA GATGCCCATC
GCCGCACGCT ACGGCATGAC GGCACTGCCC GGGCTGGCAT GGACGGGAGA TTTCCACGTC
ACGCACCGCA TGCACTACGT CTTCGCAGCC CTGCTGCTGG GACTCGGGGG CTGGCTTCTC
GGCAAAGCGT TGCGGCAGCG CGCCTTCCCG GCACTCACCC GCGAGGGCTG GCTTCGTCTC
GGGCTTGTGG CCGGACTGGC AGGCACCGGG GTGTTGCGCG TGCTCAAGAA CCTGCCCGAC
GTGAGCTTCA GCCCCCTGCT GACCTTATGG ATAGACCTCG CCCACCTCGG CCTCGCCGTT
GCGCTGGGCG CGGTTGCGCT CGTCTTCGCC TTCACGGGGC GCGCGGCATG GACCCGCCCC
CGCCCACCCG CCGGACGTCC CCCCGCATAG
|
|---|
| Protein sequence | MSASTAVRGK RISRRRFLGG LGIAGTALAL PAGARADVPA MPGASSGKTP TVYATLYDLD
RCVGCGACVE ACHERNGARY PEPIKPFPDL VPAGTKNEDW SDRRDVDDRL TPYNWLYIQS
ATVDTPEGPR EMHVPRRCLH CANPPCANLC PWGSARRETS GAVSIEASTC LGGAKCRTVC
PWHIPQRQSG VGLYLDLMPR FAGNGVMYKC DRCADITARG GIPACIEACP YDVQTIGPRD
AIIAEAKRLA AERGWHLYGL DDNGGTNTIY LSPVPFGLLD AAIPKGPGRP HLAPVADAMR
DETRLAAVAA TAPLAGFGAA MLRVAADIRE AAHNDAPGAH SSHAMGKPGR AAAHRLSAPT
AIDTITPHAF LHPATSRAVR AIWLACAIVL GFTGLMQMPI AARYGMTALP GLAWTGDFHV
THRMHYVFAA LLLGLGGWLL GKALRQRAFP ALTREGWLRL GLVAGLAGTG VLRVLKNLPD
VSFSPLLTLW IDLAHLGLAV ALGAVALVFA FTGRAAWTRP RPPAGRPPA
|
|---|
| |