Gene Dvul_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0237 
Symbol 
ID4662753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp291782 
End bp293293 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content65% 
IMG OID639818433 
Product4-alpha-glucanotransferase 
Protein accessionYP_965688 
Protein GI120601288 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1640] 4-alpha-glucanotransferase 
TIGRFAM ID[TIGR00217] 4-alpha-glucanotransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0624172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGC GCGCAAGTGG CATCCTGCTG CATTTCTCCT CGTTACCATC CGTCGGGGGC 
ATCGGCGACA TCGGCCCTGT GGCCCATGCC TTCGTGCGCC TCTTGGCGTC GGCGGGCCAG
TCGTGCTGGC AATTCCTCCC CCTCAATCCG ACATCGACGT TCATAGGCAA CTCACCCTAT
TCGAGTCCCT CGGCCTTTGC GTGCAATCCG CTGTTCATCA GCCTTGAACG TCTCGCCGAC
GAAGGGCTGG TCTCATGGGC CGATATCGGC GACCTGCCGG GGGCGGGGAG CGAAGGCGGC
GCACTTTCGC GTGTCGACTA TGAGGCTGTG GACAGCCACC GGCGCCGGGT CTTGCGCGCC
GCCTACGAAC GCAACCGTGG TGCCCTTGCC GTTGATGGCG GTTTCCGTGA CTTCTGCCGC
GCCGAGGCCC ACTGGCTTGA CGACTATGCG GCCTTCGTAT CCATCAAGTC CGCCCATTCC
GGCGCAAGCT GGGACGAGTG GCCCGAGAAG CTGTGCAGGC GCGACCCTGC GGCACTGGGG
CACTGGGCCG CCAGCGAGTC GGCGGAGATG GACTATGTGC GCTTCGAGCA ATATCTCTTC
CATCGCCAGT GGCGTGAACT TCGCGCTGTC GCCGCCAATG CGGGGGTGCG CCTCATCGGT
GACGTGCCCA TCTATGTCAC CTATGACAGT GCCGACGTGT GGGCTGCGCC GCACTTCTTC
AAGCTGGGTG AAGACCTGCG ACCAGTCACC GTGGCGGGGG TGCCGCCCGA CTATTTCAGC
GAGACCGGGC AGCGCTGGGG AAACCCGGTG TACGACTGGG ATGCGTTGAG GGCCGACGGA
TACCGCTGGT GGGTGCGCCG GCTGCGCCGC AACCTTGCCT TGGCAGACAT GGTGCGCATC
GACCATTTTC GAGGCTTCGC GGGCTTCTGG GAGATTCCTG CGGAGGAGGC GACAGCCATC
AATGGTCGCT GGGTCGACGC ACCGGGCATG GAACTGTTCA CGGTGCTGTC TCGGGCGTTA
CCGGGCTTGC CGTTCATTGC GGAGGACCTC GGCGTCATCA CCCCGGACGT GCGCGAATTG
CGCGACACCT TCGCCCTGCC GGGCATGAAG GTGCTGCAAT TCGCCTTCGG CGGCGACCCG
GCATCCAACC CTGACATCCC CTTCCGGCAT GTGGAACGTT CGGTGGTCTA TACGGGGACG
CACGACAACC CGCCCACGCG GGCGTGGTTC GACGCCTTGC CGGACGGCGA CCGGTGGCGT
TTCGAGACCT ATGTCGGGCA CGAGGTGGGC TCTGACCGGG CGGCGACGGT CATGCAGCGT
CTGGCGCTGG GCAGCGTGGC GGGGCTGTGC CTCTTGCCGT TGCAGGATGT GCTCGGGCTT
GGGGGTGAGG CGCGCATGAA CATGCCCTCC ATCCCGCAGG GCAACTGGTC ATGGCGCATG
CTGCCGGAAC ATATGGAACT GCGCCGTTAC GAGGCGCTGG CGAGGATGAC GGCCCTGTAC
GGACGTTGCT GA
 
Protein sequence
MSVRASGILL HFSSLPSVGG IGDIGPVAHA FVRLLASAGQ SCWQFLPLNP TSTFIGNSPY 
SSPSAFACNP LFISLERLAD EGLVSWADIG DLPGAGSEGG ALSRVDYEAV DSHRRRVLRA
AYERNRGALA VDGGFRDFCR AEAHWLDDYA AFVSIKSAHS GASWDEWPEK LCRRDPAALG
HWAASESAEM DYVRFEQYLF HRQWRELRAV AANAGVRLIG DVPIYVTYDS ADVWAAPHFF
KLGEDLRPVT VAGVPPDYFS ETGQRWGNPV YDWDALRADG YRWWVRRLRR NLALADMVRI
DHFRGFAGFW EIPAEEATAI NGRWVDAPGM ELFTVLSRAL PGLPFIAEDL GVITPDVREL
RDTFALPGMK VLQFAFGGDP ASNPDIPFRH VERSVVYTGT HDNPPTRAWF DALPDGDRWR
FETYVGHEVG SDRAATVMQR LALGSVAGLC LLPLQDVLGL GGEARMNMPS IPQGNWSWRM
LPEHMELRRY EALARMTALY GRC