| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0229 |
|---|
| Symbol | |
|---|
| ID | 4662636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 278898 |
|---|
| End bp | 280721 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639818425 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase, isomerizing |
|---|
| Protein accession | YP_965680 |
|---|
| Protein GI | 120601280 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGCA TCATCGGCTA CGCCGGTCAT CGTCCCGCCG TTCCCGTCGT CATCGAAGGT
TTGCGCCGTC TCGAATACCG CGGATACGAC TCCGCCGGCG TCGCCTTCGT CCAGAATCGC
GAACTCAATA CCGTCCGGGC CGAGGGCAAG CTCGCGGCCC TCGAAGAGCG TCTCGCCGGA
TGTCCCAACA CCGTGGCCAC CACGGGCATG GGCCATACCC GCTGGGCCAC CCACGGCGTA
CCGGCCGAAC GCAACGCCCA CCCCCACAAA TCCAACGACG GTTCTCTCGC CATCGTCCAC
AACGGCATCA TCGAGAACTA TCAGGAGCTG AAGAACGACC TGCTCGCCAA GGGCTACGTC
TTCCACTCCG AGACCGACAC CGAAGTGCTG GCGAACCTCA TCGCCGAGGG GCGCAAGCAT
ACAGCCACCA CGCTCGACGC CTTCGCATGG GCGCTGCGGC AGGCCCACGG TGCCTACGCC
GTGGCCCTTA CCACCCCCGA AGAACCCGAC GTGCTCTACG CCGCCCGTCT TTCGGCACCG
CTCATTCTCG GCGTCGGCAC GGGTGAGAAC TTCGTGGCCT CCGACATACC CGCCTTCCTG
CCCTACACCC GCGACGTGGT GTTCCTCGAA GACGGCGAAC TTGTCCGCCT CGACGCCCAC
TCGTGGAAGG TCATGCGCAT CGCCGACCTC TCTGCGGTCG ACAAGCCCGT CCACCACATC
CAGTGGGACA TGCAGGCAGC CCAGAAGGGT GGCTACAAGC ATTTCATGCT CAAGGAGATC
TTCGAGCAGC CCAAGGTCGT CACCGACTGC CTCGCCGGGC GTGTGGACTG GGCCCGCGAA
GAGGTGACCC TGCCTGAACT CGCCGCCCTG CCCGTGCCCA AACGCCTGCA TATCGTGGCC
TGCGGCACCT CGCTGCACGC AGGCATGTGG GGCAAGCACC TGCTTGAAAG CTGGGCCAAG
GTGCCGGTGA GCGTGGAGAT AGCCTCCGAA TTCCGCTACC GCGACATCCT CCTCGACCCC
GAAGACATGG TGCTCGTCAT CAGCCAGTCG GGCGAGACCG CCGACACGCT GGCGGGCCTT
CGCATCGCCC GCGAGAAGGG CGTGAAAGTG GCGGGCCTGT GCAACGTGGT GGGGTCGTCC
ATCGCCCGTG AGGCCGATGC GGTCATCTAC ACGCAGGCGG GGCCCGAAAT CAGCGTGGCC
TCCACCAAGG CCATGTGCAG CCAGATGGTG CTGCTCACCC TGCTGGCCCT CTACTGGGGC
CGCCGCAAGG CCACACTCGC CGACGACGTG CGACACGAGG CCCTCTCCGC CCTCCGCAAG
CTTCCGGGGC AACTCGAGAG TGCGCTTCCC GGCATGCGTG ACGAGGCTCA GCAACTGGCG
CGCACCTACT CCAAGGCACG CAGCTTCTTC TACCTCGGCC GTGGGCACTG CTTTCCGCTG
GCCCTCGAAG GTGCCCTCAA GCTCAAGGAA ATCTCCTACA TCCACGCCGA GGGCTATGCC
TCCGGCGAGA TGAAGCACGG CCCCATCGCC CTCATCGACC CGGAGTTCCC CACCTTTGCC
CTCGCCCTCG CCGACGACCT CTTCCCCAAG GTGAAGTCGA ACATCGAAGA GGTGCAGGCC
CGGCGCGGCA AGGTCATCGC CCTGACCAAC CCCGGTGTGG AGGTGCGCGT CGACAATCCG
TGGGTGGTGC CCGCCGCATG GGGCCCGCTG GCGGCCTTCA TCGCCTTGCC CGCCCTCCAG
CTTTTCAGCT ACGAGGCGGC AGACTACCTC GGCAAGGACG TCGACCAGCC TCGCAACCTC
GCCAAGAGCG TGACGGTGGA ATGA
|
|---|
| Protein sequence | MCGIIGYAGH RPAVPVVIEG LRRLEYRGYD SAGVAFVQNR ELNTVRAEGK LAALEERLAG
CPNTVATTGM GHTRWATHGV PAERNAHPHK SNDGSLAIVH NGIIENYQEL KNDLLAKGYV
FHSETDTEVL ANLIAEGRKH TATTLDAFAW ALRQAHGAYA VALTTPEEPD VLYAARLSAP
LILGVGTGEN FVASDIPAFL PYTRDVVFLE DGELVRLDAH SWKVMRIADL SAVDKPVHHI
QWDMQAAQKG GYKHFMLKEI FEQPKVVTDC LAGRVDWARE EVTLPELAAL PVPKRLHIVA
CGTSLHAGMW GKHLLESWAK VPVSVEIASE FRYRDILLDP EDMVLVISQS GETADTLAGL
RIAREKGVKV AGLCNVVGSS IAREADAVIY TQAGPEISVA STKAMCSQMV LLTLLALYWG
RRKATLADDV RHEALSALRK LPGQLESALP GMRDEAQQLA RTYSKARSFF YLGRGHCFPL
ALEGALKLKE ISYIHAEGYA SGEMKHGPIA LIDPEFPTFA LALADDLFPK VKSNIEEVQA
RRGKVIALTN PGVEVRVDNP WVVPAAWGPL AAFIALPALQ LFSYEAADYL GKDVDQPRNL
AKSVTVE
|
|---|
| |