Gene Dvul_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0208 
Symbol 
ID4662184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp256815 
End bp257780 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content67% 
IMG OID639818404 
Producttrans-hexaprenyltranstransferase 
Protein accessionYP_965659 
Protein GI120601259 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.647597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAGC TCAAAGCCCG CATCATCGCC GAACAGCCAC GCTTCAACGC CACCCTCGCC 
ACCGAGGTGG GCACCCTGCA CCCGCTGGTG CAGCCCGTGG CAGCACATGT CCTCAAGGCG
GGGGGCAAGC GCCTGCGCCC GTTGCTCACC CTGCTCGTGG CGCGTGCCCT CGGCTACGCC
GACGACGACA TCTACCCGCT CGCCTGTTCG GTGGAACTCT TGCATTCGGC CACCCTCCTG
CATGACGACA TCCTCGACGA CGCCGACCTG CGCCGGGGCA TGGCAGCGGC GCACACTGTG
TTCGGCAGCA CCGCCACCGT TCTCGCCGGT GACGCGCTGC TGGCCCTGGC CAACCTCATC
GTCGCCCGCT ACGGCGACCC GCGCCTCACC GCGTGCATCT CCGAGGCCAT CATCCGCACC
GCCACGGGCG AGATCGTCGA AATCGCGCAT ATGCGCGGCA CAGACCACGG ACGAGACACC
TATATCGACA TCATCACCGG CAAGACGGCA TGGATGCTGC GGGCCTCGTG TGAACTGGGG
GCCCTGCGTG CAGGGGCATC CGAAGAGGCC GTCCGCGCCG CAGCCGCCTT CGGCCTCGAC
CTCGGCATCG CCTTCCAGAT AGTCGACGAC GCCCTCGACT TCGCCGACCG CGCCGATACC
GGCAAGCCCG TGGGCGGCGA CCTGCGGGAG GGCAAGCTCA CCCCGCCCCT CATCTACTAT
CTCGAAACCC TCTCCGGTCC CGAGCGCGAG GCCTTCATCT CCCGCTTCCG GGACGGGGGG
TTCTCCGGCG ACGACGTGGC CCGCATCTCC GCAGAAATCC GCACCCTCGG CATCATCGAG
CGTACGCGCG AACTTGCCGG AAACTACATC GAGAAGGCCG CCGCTTCGCT CGAGACATTG
CCTGACTGTC CCGAACGTCG TACCCTGATG CAGACGCTCG CATACGTGCA GCATCGCGAC
AGGTGA
 
Protein sequence
MQELKARIIA EQPRFNATLA TEVGTLHPLV QPVAAHVLKA GGKRLRPLLT LLVARALGYA 
DDDIYPLACS VELLHSATLL HDDILDDADL RRGMAAAHTV FGSTATVLAG DALLALANLI
VARYGDPRLT ACISEAIIRT ATGEIVEIAH MRGTDHGRDT YIDIITGKTA WMLRASCELG
ALRAGASEEA VRAAAAFGLD LGIAFQIVDD ALDFADRADT GKPVGGDLRE GKLTPPLIYY
LETLSGPERE AFISRFRDGG FSGDDVARIS AEIRTLGIIE RTRELAGNYI EKAAASLETL
PDCPERRTLM QTLAYVQHRD R