Gene Dvul_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0205 
Symbol 
ID4662170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp248744 
End bp250753 
Gene Length2010 bp 
Protein Length669 aa 
Translation table11 
GC content64% 
IMG OID639818401 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_965656 
Protein GI120601256 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGC AACGCTCGCT CGGCACCAAG GTCATGCTCC TTGTGAGCGG CATCTCGCTT 
TTCGTCTTCC TCATCCTCGC CGTACTCACC TCGTACTGGC AGCGGCAATC CGCCCTGACC
CTCATCGACA GCGGCGCCGT GCGCGCCTCT GAACTGCTGC TTGATGCCAT CGCCGACCCC
ATGTCCAAGG GCAACGACAC AGGTACGACC GAGAAGTTCG ACGCCATCGC CAGACGTTAC
GCCGACATTC GCGCGTACAT GACGGACTTC AGGGGCAACA TCACCTACTC CACCTCAAAG
GATGTGCTGC GGCGCGACCT CGCTGACGTG GTGCAGGCAC CTGCCCTGCT CGACAAGTTC
AATGCCGCGC TCAAGACCGA CAGCCGCGAA GAGCAGCTTG CCACCATCGA CGGCATGGCG
TTCTACGCCA CCATCCGGTC CATACCCAAC GCGCCAGAAT GTCACCACTG TCATGGACGC
AGCCAGCCCA TCCTCGGTAC GCTCGTCATG CTGCAGGACG TCACCCCTGC CATGAGTGAG
CTGCGTCTGC ACCAGTACGA GACCGTGGGG CTTTCCGTGG GCGGTCTGCT CTTGCTGGTG
GGCGTGCTGT CGCTCTTCAT GCGACGCGCC GTCATCTCGC GGGTACAGCG CATCGCCGCC
GTAAGCGGAC AGATTGAACA GGGCGACTAC AGCGTGAGCT TCGAGCATGA CGGCAACGAC
GAACTCACAC GGCTCAACGC CAACCTCGCC AGCATGGTCA CGACCATACG CGACCAGATG
CAGTACAACC GCTCGGTGCT CGAAGGCATC ATCGTCCCGC TTGCCGTGGT CGACGCCAGA
AACCGCATCG AATTCATCAA CCAGCCCATG TGCACCATCG TCAGCACAGC CTGCCATGAA
TACTCGGGCA AGGATTTTTC CGCGTTCATG CAACAGGGCG GCGTCGAGGA GGACATCACC
GCCACCGTCC TGAAAGGCGG TAACAACCAG CAGGGCAACA TCAGCTACCG CCGCGACGAC
GGCACCGTCT TCCCCCTGCA CTACGAGGTC TCGCCGCTGC GCGATGACAG GGGGGCCGTG
AACGGCGCCA TCGCCGTCAT CATCGACCTG ACGCAAGAGG AGGAGGCGCG GCGCCGCATC
GAGGAACAGC GCATCAACCT GTTGCGTGTC GCCGACGAGG TGACGGGCGT GGCCGAGACG
CTGGTGCGTG CCGCCGAGGC TTTGGTCACA CGCATGGGCG AACTCGAGCG CGACGCCACA
GAGGCAGCCT CCGAGACCAC GCAGGTGGCT ACCGCCATGG AGGAGATGAA CGTCACCGTC
ACCGAGGTGG CACGCAACGC CTCCAGCACC GCCGAGATGG CCGACCTCGC CAATGGCGAG
GCCCAGTCGG GCGGTACGGA GATGGCCAAC ACCGTGCGCG AGACGCGACA GGTGGCCCAG
CGCACCGAAG ACCTCGCCGA ATCGCTGCAT GAACTGGCAC GCAGGGCGGA CAACATCGGG
CGCGTCATCG AGGTCATCAA CGAAATCGCC GACCAGACCA ACCTGCTGGC ACTCAACGCC
GCCATCGAGG CCGCCCGTGC AGGAGATGCC GGACGCGGCT TCGCCGTGGT GGCCGACGAG
GTCCGCAAAC TGGCCGAGAA GACCATGGTG GCCACACGCG AAGTGGAACA GGCCATCGCG
GCCATCCAGC AGGGCAGCAA CGACGCCGTC GAGGTCATGA CCGAGACCCG GCAGCAGGTC
GAAGTGACGG CAGGCAAGGC CGAGGACACC GGCAAGGTTC TCTCGGGCAT CGTGGGCAGG
GCCGAAAGCA TCGCCGACAT GGTGCGCAAC ATCGCCACCG CGTCGGAACA GCAGTCGTCC
ACCAGCGACG AAATCAACCG CAACGTCACC CGCATCAACG ACCTCACCGA AGGCATCCAG
AGACGGGTGC GGGAAGCAGG CGATGCCATC CGGCAGGTCG AGGGCATGGC CCAGAGGCTT
GAGGCCCTCG TCGACGGTTT CCGCAAATAA
 
Protein sequence
MSTQRSLGTK VMLLVSGISL FVFLILAVLT SYWQRQSALT LIDSGAVRAS ELLLDAIADP 
MSKGNDTGTT EKFDAIARRY ADIRAYMTDF RGNITYSTSK DVLRRDLADV VQAPALLDKF
NAALKTDSRE EQLATIDGMA FYATIRSIPN APECHHCHGR SQPILGTLVM LQDVTPAMSE
LRLHQYETVG LSVGGLLLLV GVLSLFMRRA VISRVQRIAA VSGQIEQGDY SVSFEHDGND
ELTRLNANLA SMVTTIRDQM QYNRSVLEGI IVPLAVVDAR NRIEFINQPM CTIVSTACHE
YSGKDFSAFM QQGGVEEDIT ATVLKGGNNQ QGNISYRRDD GTVFPLHYEV SPLRDDRGAV
NGAIAVIIDL TQEEEARRRI EEQRINLLRV ADEVTGVAET LVRAAEALVT RMGELERDAT
EAASETTQVA TAMEEMNVTV TEVARNASST AEMADLANGE AQSGGTEMAN TVRETRQVAQ
RTEDLAESLH ELARRADNIG RVIEVINEIA DQTNLLALNA AIEAARAGDA GRGFAVVADE
VRKLAEKTMV ATREVEQAIA AIQQGSNDAV EVMTETRQQV EVTAGKAEDT GKVLSGIVGR
AESIADMVRN IATASEQQSS TSDEINRNVT RINDLTEGIQ RRVREAGDAI RQVEGMAQRL
EALVDGFRK