Gene Dvul_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0172 
Symbol 
ID4662635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp207234 
End bp208931 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content63% 
IMG OID639818368 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_965623 
Protein GI120601223 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCG GCGGCTACAC CCGACTGCGA CGTAGATTGA TGCTGGCCAT GCTGGCGTTT 
TCGCTGGTGC CCCTGCTTGC GCTGGGCCTT TTCTTCCAGA AGCAGTTCAC GGGAACCTAC
AACGAAAAGC TGGTCTCCGG TCTCGAAGCC GTGACCGAAA GCAAGCGGCG CGCCCTTGAT
ACGTTCCTTG AGGAGCGCGT CTCGCAGATA AAGAGCCTCG TCTACACGCA CAGCTTCGAG
GAACTCTCGA ACCCGGCGCG TCTCGGCGAG ATATTCTCGG TCATTCAGGC CAATGCACGT
TCATACGTCG ATATCGGCAT CATCCTCTCC AACGGAACCC ATGCGGCATA TGTCGGTCCC
TACAACCTCG AAGGGGCCAA CTACATGGAC GAACCGTGGT TCCAGGAGGT GATGCTGAAA
GGGCAGTACG TCAGCGATGT CTTCCTCGGT TTCCGCAAGT ACCCGCATTT CGTCATCGCC
GTGGCACGGC GCGAGGGGGC GCGGACATGG ATCGTGCGGG CCACCATCGA CTCCGCCGCC
ATCAACCAAC TGCTGCGCCG TTCCTATTCG GGGAACAACA GCGACGCCTT TCTGCTGAAC
ACCGAAGGAC TTCTGCAGTC GGACTCGCGC AACAACGGCG AGATCATGTC ACATTCCGCC
ATTCCCCTGC CGCCCCGCGG CAAGCGGGGC ATCCTCATCG AACCCACCCA CAGCGCCGAC
GGACGCCCCA TGATCGCCGC CATGACATGG CTCGAGCGGA TGCCGTGGCT GCTGGTGGTC
ATGGAAGACC CGCGCGAACC CCTTTCGCCG CTTGAGCGTA CCAACCTGTT GCTGGTGCTG
TTCGTCATGG GGGGCGTGGC GGTCATCTGC CTCGGAACCT TCCTCACCAC CCGAGCCATC
GTCGGCAAGC TCAAGGATAG CGACCGGAAG CAGGCCATGC TCGATGCGGA GTTCCTGCAG
TCGAGCAAGA TGGCGGCCCT TGGCAAGCTG GCGGCGGGCG TGGCCCACGA AGTGAACAAT
CCCCTCATGC TCATCCGCGA GAATGCGGGC TGGATCAAGG ACCTCCTCGT GGAAGAGGAC
CCCGCAGCCA TGCGGAACCA CAAGGAGCTT GTCACCGCCG CCGACAAGAT CGAGATGCAT
GTGGACAGGG CCAAGGGCGT GACGCACCGG ATGCTCGGGC TTGCGCGCCG TCTTGAGCCG
CTGCAGGACG ACGTGTGCGT GAACCTGCTC ACCGAGCAGA CCATCAAGTT CCTTGAGACC
GAGGCCCTGC ATCGCCATAT CACCCTCGTC AAGGAACTGG CGGACGACCT GCCTCCCATC
ACGACCGACG CCACGCAAGT GCAGCAGGTG CTGCTCAACA TCCTCGACAA CGCCATCGAC
GCTGTGGGCC GCGACGGCAC CATCACCATT CGCACCGGGG CCGCCCCGGA CAGGAGCGAG
GTCTTCGTCT CGGTCAGTGA TACGGGCGAG GGCATCCCCC CCGAACTGCT CTCGCGCATT
TTCGATCCGT TCTACACCAC CAAGAAGGTG GGCGAGGGCA CAGGACTCGG CCTCGCCATC
TGCCACTCCA TTCTCGAAAA ACTCGGAGGC CGCATCCACG CCGCGAGTGC GCCCGGACAG
GGGGCCACCT TCACCGTGAC CCTGCCCCTG GCCGCCAACC CCGCCCTCGC CGCCGACGGG
ATGCTGAACC TGCGCTGA
 
Protein sequence
MEIGGYTRLR RRLMLAMLAF SLVPLLALGL FFQKQFTGTY NEKLVSGLEA VTESKRRALD 
TFLEERVSQI KSLVYTHSFE ELSNPARLGE IFSVIQANAR SYVDIGIILS NGTHAAYVGP
YNLEGANYMD EPWFQEVMLK GQYVSDVFLG FRKYPHFVIA VARREGARTW IVRATIDSAA
INQLLRRSYS GNNSDAFLLN TEGLLQSDSR NNGEIMSHSA IPLPPRGKRG ILIEPTHSAD
GRPMIAAMTW LERMPWLLVV MEDPREPLSP LERTNLLLVL FVMGGVAVIC LGTFLTTRAI
VGKLKDSDRK QAMLDAEFLQ SSKMAALGKL AAGVAHEVNN PLMLIRENAG WIKDLLVEED
PAAMRNHKEL VTAADKIEMH VDRAKGVTHR MLGLARRLEP LQDDVCVNLL TEQTIKFLET
EALHRHITLV KELADDLPPI TTDATQVQQV LLNILDNAID AVGRDGTITI RTGAAPDRSE
VFVSVSDTGE GIPPELLSRI FDPFYTTKKV GEGTGLGLAI CHSILEKLGG RIHAASAPGQ
GATFTVTLPL AANPALAADG MLNLR