Gene Dvul_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0159 
Symbol 
ID4662786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp194649 
End bp195446 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content62% 
IMG OID639818355 
ProductFliA/WhiG family RNA polymerase sigma factor 
Protein accessionYP_965610 
Protein GI120601210 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACAT CAAGTTCTTC TGGAAAAAGC TGCTCTTCCG CAGCTAGCCC TTGGGAGGCG 
CTTGAGGCCG GAACGACGGC ATGGCCCGAC TTCGCCCCGG CGGAGAAGGA GGCCATCGTC
CGTCATTACG CGCCCAAGAT ACGCTTCCTC GCCTTGCGCC TGAAGGCCAA GCTGCCGCGC
AACGTTGAGC TTGGCGAACT CATCAGCGCG GGCACGCTGG GTCTCATGGA GGCGCTTGGC
AAGTTCAAGC CGCAACTGGG CATCCGCTTC GAGACCTACG CCGAAAGCCG TATCCGCGGG
GCCATGCTCG ACGAGTTGCG AAGGCTCGAC TGGTTTCCGC GAAGTCTGCG GCAACGGGTG
CGCCAGCTTG ACGAGGCCAT GCAGCGCATC GAGCACGAGA CGGGGCGGCG CGCCACTGAA
GAAGACTTGC AGAAGGCCAC GGGGCTGGAC GAAAAGGACG TACGACTGGG GCTTGAGGCG
TTGCAGAACC AGCTGTGCCT TTCGCTGGAG GCCATGCAGG ATTCGCTGGC GGGTGAAGGC
GGCCCGCAGT CGGACGCCGA CCCCATGCAG ACCGCAGCCA CGCAAGAGCT CATCGAGCGC
GTGGCCTCTC TCATCGACGA ATTGACACCA AGAGAGAAGT TGGTATTGTC ATTATATTAC
AGTGATGAAC TGAACATGCG CGAAACCGCA GAAGTCATGG GCATCACCGA GGGGCGGGTC
TCGCAGTTGC ACTCACAGGC GCTGGGTAGG CTGCGTCGCG AATTCCGCAA CCATTACGGC
GAGCACGACG CCGTCTAG
 
Protein sequence
MVTSSSSGKS CSSAASPWEA LEAGTTAWPD FAPAEKEAIV RHYAPKIRFL ALRLKAKLPR 
NVELGELISA GTLGLMEALG KFKPQLGIRF ETYAESRIRG AMLDELRRLD WFPRSLRQRV
RQLDEAMQRI EHETGRRATE EDLQKATGLD EKDVRLGLEA LQNQLCLSLE AMQDSLAGEG
GPQSDADPMQ TAATQELIER VASLIDELTP REKLVLSLYY SDELNMRETA EVMGITEGRV
SQLHSQALGR LRREFRNHYG EHDAV