| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0143 |
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| Symbol | |
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| ID | 4662929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 174879 |
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| End bp | 176504 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639818339 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_965594 |
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| Protein GI | 120601194 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.302016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAA GCCCTCACCG CCCGCATCCT GACAGGAGCC CTTCAGGTCG CCATAGCACC
TTTACCCCCC TTCTTCGCGC CTGCCTGACA CCCGTTCTTC TGCTCACCCT TCTGACAGCC
TGCGCCAAAG TGGGGCCGGA CTTCAGCGCC CCCGGGGGGG ACGTCCCCGA CGTCTGGCAG
GATGCCTCAC ATCCTGTGGC ATCCTCCGAT GCGGATGTGG ACGGAACGTG GTGGAACACC
TTCAATGACC CGGTGCTGGA CAGCCTCGTC ACGGAAGCGC GTAGCGCGAA CCTGTCACTC
CACCTTGCGG CGTTGCGCGT CTTCGAAGCC CGTGCGCGGC TGGGGGCGGC GGTAGGCAAC
CTCTACCCGC AAACGCAGCA GGGGACCGGG GGCCTCACGT GGACACACCC CAGCGACAGG
GCGCCCACAG CCCCGCAGCC GACGACGGGG CGCGACAACC CCGACTATGT ACAGACGAGC
GCAGGTCTCG ATGTCGTCTG GGAACTCGAC TTCTGGGGCA AATTCCGCAG GGGCATCGAG
GCCGCAGATG CGGACCTGCG CGCGTCGATG GCAGACCATC AGACCGCGCT GGTATCCGTC
TCCGCCGAAG TCGCCCGTTC CTACATCCTG TACCGCACGG TGCAGAAACA GCTTGCCATC
GCGGAGACCA ACGTGGCCAT CCAGCGCGAG AGTCTGCGCA TCGCCACGGC CCGCTTCAAT
TACGGCGCCA CCAGCGAACG CGACATGCGA CAGGCCCTCT CGCTGCTACG CGACACCGAG
GCGCGCATCC CCAATCTTGC CCACTCTCTC CGCGAGACCC GCAATGCGCT TTGCGTGCTG
CTTGGCAAGG CCCCGCAGGA TATCAGCGCA CGACTCGGAG ACGCGCCCAT ACCCACCGCC
CCAACACACG TCGCGGTGGG CATACCCGCC GACCTGTTGC GGCGGCGTCC CGACGTACAC
AAGGCCCTCG CCACAGCCGC AGGGCAATGC GCACGACTCG GCGTGGCCAA GGCCGATTTC
TACCCGGCCT TCACACTGGG CGGCTTCGTC GGGTTCACAG CCAGCAATGT CGGGTCGTTC
GGGCTTGGAG ACACGTTCTC GAACGGCTTC ACCGCGTATG GGGGGCCCGG ACTTTCCCTG
CCCCTGTTCA ACTACGGACG CATTGTCAGC AACGTACGCG CGCAGGACGC CCGGTTCCAG
CAGTCACTGA CAAGCTATCG GGAGACCGTA CTGGTGGCCC TTCGTGAGAC GGAGGACGCC
ATAGACAGGT TCATTCAGGC GCAGGGCCGT ACGGCACTGC TGACCGAAAG CGCATCCGAC
GCCGCACGGT CCATGCAACT GGCCCTCATC CAGTATCAGG AAGGTTCCAC CGATTTCACC
ACCGTGCTCA CCGCAGCGCG CGACCTCGCA ACCAGAGAAG ACGCCCTCGC CGCGGCCAAA
GGCGAAATCT GCCAGAGCCT CGTCGCCATG TTCAAGGCAC TGGGAGGAGG CTGGCACAAG
CTTCCCGGCG ACGTCTTCAT TCCCGTCAAC GCCCTCCGTG AGATGCGTGA ACGCACACAC
TGGGGCTCAC TGCTTGAAGA GGATGCCCCA CCAGCGAGTG AGGGCATCAG GCTACCCGAC
ATGTAG
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| Protein sequence | MPESPHRPHP DRSPSGRHST FTPLLRACLT PVLLLTLLTA CAKVGPDFSA PGGDVPDVWQ
DASHPVASSD ADVDGTWWNT FNDPVLDSLV TEARSANLSL HLAALRVFEA RARLGAAVGN
LYPQTQQGTG GLTWTHPSDR APTAPQPTTG RDNPDYVQTS AGLDVVWELD FWGKFRRGIE
AADADLRASM ADHQTALVSV SAEVARSYIL YRTVQKQLAI AETNVAIQRE SLRIATARFN
YGATSERDMR QALSLLRDTE ARIPNLAHSL RETRNALCVL LGKAPQDISA RLGDAPIPTA
PTHVAVGIPA DLLRRRPDVH KALATAAGQC ARLGVAKADF YPAFTLGGFV GFTASNVGSF
GLGDTFSNGF TAYGGPGLSL PLFNYGRIVS NVRAQDARFQ QSLTSYRETV LVALRETEDA
IDRFIQAQGR TALLTESASD AARSMQLALI QYQEGSTDFT TVLTAARDLA TREDALAAAK
GEICQSLVAM FKALGGGWHK LPGDVFIPVN ALREMRERTH WGSLLEEDAP PASEGIRLPD
M
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