| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0141 |
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| Symbol | |
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| ID | 4663297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 170496 |
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| End bp | 173639 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639818337 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_965592 |
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| Protein GI | 120601192 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.385412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCGA AATTCTTCAT CGACCGCCCC ATTCTGGCTA ACGTCATCGG CATCGTGCTC
ATTCTCATCG GCGTCGTCTC GGTCATGCTG CTACCCATTT CGCAGTATCC TGAAATCACG
CCCCCCACGG TCGAAGTAAA GGCCATCTAT CCGGGCTCGA ACTCGCTGGT ACTCGCCGAC
ACCGTCGGGG CCCCTATAGA ACAGGAGGTC AACGGCGTCG AAGGCATGCT CTACATGTCC
TCCAAGAGTG CCAACGACGG AACCTACACC CTGACGATCA CCTTCGCCCT CGGAACCAAC
ATCGACATGG CGACCGTGCT CGTCCAGAAC CGCGTCAACG TGGCCATGGC GCGCCTGCCC
GACGAGGTGA AACGACAGGG CGTAACGGTC AAGAAGAAGT CGACCGCCAT CCTTCAGGTT
GTCACACTCA CCTCGCCGGA CGGATCATAC GACGACCTCT TCCTGAGCAA CTTCGCATCA
CTGCGCATCA GGGACGAGCT TGCCCGCATA CCGGGCGTGG GCGAAGCGAC GGTGTTCGGC
GCCGCAAGCT ATTCGATGCG TGTCTGGCTT GATGCGCCCC GGCTCAAGAG CATGGGGCTC
ACGACAAAGG ACGTGGTCAA CGCCATCAGC GAACAGAACG TTCAGGTCGC TGCGGGCCAG
ATAGGCGCAC AGCCCGCGCC CGACACCCAG AACTTCCAGT TCACGGTGCA GACGCAGGGC
CGTCTGTCCA ATGTCGAGGA ATTCGAGGAC ATCATCATCC GGACGGCGAC ATCCGGGCCT
GCGGGGCGTG TCGTACGGGT GCGCGACGTG GCGCGCGTCG AACTCGGCGG GCAGACATAC
GACCTCTACG CACAGAAGAA CGGCAAACCT GCGGCACTCG TCATCATCTA TCAGCTGCCG
GGTGCCAACG CGCTGGATGT GGCACAACAG GTCAACGCAC GCATGAAGAC CCTCGGCAAC
GACTTCCCGC AGGGGGTCGC ATGGGATGTC CCCTACGACA CGACGCGATT CGTCGAAGCC
GCCATCGAAC AGGTCTACCA CACACTTTTC GAAGCAGCGG TGCTCGTCCT CGCCGTCATA
CTCATCTTCC TGCAGGACTG GCGTGCGACG CTGGTTCCGG CATCCGTCGT GCCCATCACC
ATCCTCGGTG GTTTCATGGC CATGATGGGC CTCGGTTTTT CGGTGAACCT CGTCACGCTC
TTCGGCATCA TACTCGCCAT CGGCATCGTG GTTGACGACG CCATCATCGT CGTCGAGGGC
GCGGCGCACC ACATGGAACA TGGCGACCCC GCGCGCGAGG CCACCATCAA GGCCATGATG
CAACTCTTCG GCCCCATCAT CGGCATCACA CTGGTGCTGT CGTGCGTGTT CATCCCCGCA
TCGTTCATGT CCGGCATCAC CGGGCAACTC TACAGGCAAT TCGCCCTCGT CATCGCATCG
ACAGCCCTTG TCAGCGCCCT GCTTGCCGCC ACCCTCACCC CGGCACAGTG CGCCCTCTTC
CTCAAACCCA TCGTACCGGG TCGCAACGCC TTCTACCGCG GGTTCAACAA GTCCTACGAT
GCCGTCGAGA ACCTGTTCGT CACGATTCTG CGCACCATGG TGCGGCATGC GAAGACCACC
ATGCTCGTCT TCGTCGGCCT CATCACGGCC ACCTTCTGGG CGTTCACCTC GCTACCCACG
GGGTTCCTGC CCGACGAGGA CCAGGGCTAT GCCCTTGTGG CGGTGCAGCT GCCCGGTGCC
GCATCACAGG CCCGTACGCG CGAGGTGACC ACCAGACTCG ACGCCATCTT CTCCGAGACG
CAGGGTGTCG CAGACTGGAT AACCTTTGGC GGCATGTCCA TCCTGAACGG CGCCAACACC
TCCAACTCCG CCACGGTGTT CGTCATGTAC AAGGACTGGA GCGAACGCGG GGCACTCACG
CAGGAGAGAA TCGTCGCCGA CCTGCGTCGC AAGGTCGCGT CCATTCAGGA AGGGATGGTG
ATTGTCGTGA CGCCGCCCCC CATACAGGGA CTGGGCAACG CTGGCGGATT CGAAATGATG
GTGCAGGACC GGGCGGCGCT GGGGGCCCAG CAACTTGAGA CCGTGGCCTA CTCGATGATG
GCGGCTGCAC GGGGGCAGTC GGGCCTTGGC AATGTCTCGA CGACATACAA CGCCCGCACA
CCGCAGCTTT TCGTCAACGT GGACCGTACG CAGGTCAAGA ACTACGACGT GCAACTCAAT
GACGTCTTCA GCACGATGCA GTCCTACCTC GGCTCATCCT ATGTCAACGA CTTCAACAAG
TTCGGAAAGA CATATCAAGT CCGGGTGCAG GCAGACAGCC GTTATCGCCT CACCGCAGAG
GACATCGGTC GCCTCGAAGT GCGCAACGCA CAGGGCGGCA TGGTGCCTCT GGGCGCGGTG
ACCGACGTGA AGGATGTCGT CGGACCCGAC GTGGTCACCC GCTACAATCT CTACCCTGCG
GCCTCCCTGA TAGGCGCCGC CGCACCGGGA TTCAGTTCGG GCCAAGCCCT CGCCCTGATG
GAAGACATGG CCCGCAAGAC CCTGCCGCAG TCGATGGGAT TCGAATGGAC GACCATGGCC
TATCAGGAGA AGGCGACGGG CAACGAGGCC TTCGCCGTCT TCGGCTTCGC CGTGCTGCTC
GTCTTTCTCG TACTGGCGGC CCAGTACGAA AGCTGGTCCG CCCCGGCCGC CATCATCATG
GTCGTTCCGC TGGCCCTTCT TGGGACCAGC ATCGCCGTTG CGGCGCGTGG CATGGACAAC
AACGTCTACA CGCAGATAGG CATCGTGCTT CTCATCGCGC TGGCGAGCAA GAACGCCATC
CTCATCGTCG AATTCGCCCG CGAACTCCGC CTCCAGAAAG GCATGTCCAT TCAGGATGCC
GCAGTCGAGG GGGCCCGTGC GAGGTTCCGC CCCATCCTCA TGACCTCGTT CGCCTTCATC
CTTGGCGTCG TTCCCCTGCT CACCGCCTCC GGCGCGGGTT CAGCCAGCCA GCGAGCGCTC
GGCACGGCGG TCTTCGGAGG CATGCTGGCA TCGACATTCC TTGCCGTGCT CTTCGTCCCG
GTCTTCTTCA CTGTCATCCA GACCTTGAGC GAAGGCCTTT CGCGTCAATC GTCACCCAGC
CAGAAGAACA TCAACCACAA GTGA
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| Protein sequence | MFAKFFIDRP ILANVIGIVL ILIGVVSVML LPISQYPEIT PPTVEVKAIY PGSNSLVLAD
TVGAPIEQEV NGVEGMLYMS SKSANDGTYT LTITFALGTN IDMATVLVQN RVNVAMARLP
DEVKRQGVTV KKKSTAILQV VTLTSPDGSY DDLFLSNFAS LRIRDELARI PGVGEATVFG
AASYSMRVWL DAPRLKSMGL TTKDVVNAIS EQNVQVAAGQ IGAQPAPDTQ NFQFTVQTQG
RLSNVEEFED IIIRTATSGP AGRVVRVRDV ARVELGGQTY DLYAQKNGKP AALVIIYQLP
GANALDVAQQ VNARMKTLGN DFPQGVAWDV PYDTTRFVEA AIEQVYHTLF EAAVLVLAVI
LIFLQDWRAT LVPASVVPIT ILGGFMAMMG LGFSVNLVTL FGIILAIGIV VDDAIIVVEG
AAHHMEHGDP AREATIKAMM QLFGPIIGIT LVLSCVFIPA SFMSGITGQL YRQFALVIAS
TALVSALLAA TLTPAQCALF LKPIVPGRNA FYRGFNKSYD AVENLFVTIL RTMVRHAKTT
MLVFVGLITA TFWAFTSLPT GFLPDEDQGY ALVAVQLPGA ASQARTREVT TRLDAIFSET
QGVADWITFG GMSILNGANT SNSATVFVMY KDWSERGALT QERIVADLRR KVASIQEGMV
IVVTPPPIQG LGNAGGFEMM VQDRAALGAQ QLETVAYSMM AAARGQSGLG NVSTTYNART
PQLFVNVDRT QVKNYDVQLN DVFSTMQSYL GSSYVNDFNK FGKTYQVRVQ ADSRYRLTAE
DIGRLEVRNA QGGMVPLGAV TDVKDVVGPD VVTRYNLYPA ASLIGAAAPG FSSGQALALM
EDMARKTLPQ SMGFEWTTMA YQEKATGNEA FAVFGFAVLL VFLVLAAQYE SWSAPAAIIM
VVPLALLGTS IAVAARGMDN NVYTQIGIVL LIALASKNAI LIVEFARELR LQKGMSIQDA
AVEGARARFR PILMTSFAFI LGVVPLLTAS GAGSASQRAL GTAVFGGMLA STFLAVLFVP
VFFTVIQTLS EGLSRQSSPS QKNINHK
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