Gene Dvul_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0097 
Symbol 
ID4664310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp116317 
End bp117576 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content67% 
IMG OID639818291 
Productaromatic amino acid transporter 
Protein accessionYP_965548 
Protein GI120601148 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00837] aromatic amino acid transport protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.103921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.507347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACG CGGCTCATCG CCCCGGGCAG AACGCGGCTC ATCGCCCCGG AGTCTTCGGT 
GGCACCATGA TCATCGCCGG TACGTCCATC GGCGCAGGCA TGCTCGCCCT GCCCACCATC
TCGGCGGGCA TGTGGTTCGG CTGGTCGCTT GCGGTCATGC TGCTGGCGTG GCTGGTCATG
CTGCTTTCGA GTCAGGCACT GCTCGAGGTG AACCTGCATT TCGAACCGGG GGCCAGCTTC
CACACCCTCG TCCGCGAGAC ACTCGGCCCC GGCTGGAGCG TCATCAACGG CGCGGCCGTG
GCTTTCGTGC TGTACATCCT CGTCTACGCC TACGTCAGCG GCGGCGGTTC CATCATGCGG
CACACCCTGC TGGCGGTCTT GGGCTACGAA CCCTCGAAGC TGGCGGCGGG CCTCTCCTTC
GCGTTGCTGT TGGCGGCATG TGTGTGGTGG GGCACATGGA TCGTCGACCG TCTGTCCGTC
ATCATGATGG GCGGCATGGT CGTCAGCTTC ATCCTCTCCA TGTCCGGGAT GCTCTCGGAC
ATCCGCGCCG ACGTGCTCTT CGACGCCGGA GGCGAAGGCG GTTCGGCCCT CTTCGTGTGG
GGGGCCCTCT CGACCTATCT CACCTCGTTC TGCTTCCACG CCAGCGTGCC CAGCCTCGTG
AAGTACTTCG GACGCAGGCC CGCCGACATC AACCGCTGCC TCATGGGGGG CACGGGCATC
GCCCTCGTCT GCTACCTGCT GTGGATAGTG GCGTGCGACG GCACCATCCC CCGCGCGGAG
TTCAGGGATG TCATCGCCGC AGGCGGCAAC GTGGGCGACC TCGTGCGTGC AGCAGGTTCC
AACCTGAACA GTGATTTCAT CCTGCGGATG CTCGAAGCCT TCTCCGCACT TGCGGTGGCC
ACCTCGTTTC TCGGGGCGGG CTTGGGCCTG TTCGACTACA TCGCCGACCT GTGCCGCTTC
GACGACACGC GCGCCGGACG CACGAAGACC ACGCTGGTCA CCTTCGGCCC TCCCACCGTG
GGCGGTCTGC TGTGGCCTGA CGGCTTCCTG CTGGCCATCG GCTGGGCGGG GCTTGCCGCC
ACGGTGTGGT CGGTGGTCGT TCCCGCACTC ATGCTGCGGG CGAGTCGCGC CACACGTCCC
GCGCCGGGCT ACCGTGTCGG CGGCGGCAGC CTTACGGTGC CTGCACTGCT GGCCTTCGGC
CTCGTCACCG CCGTGTGCCA CACGCTCTTC GTCTTCGGCG TGCTGCCCAT GTACAGGTAG
 
Protein sequence
MQNAAHRPGQ NAAHRPGVFG GTMIIAGTSI GAGMLALPTI SAGMWFGWSL AVMLLAWLVM 
LLSSQALLEV NLHFEPGASF HTLVRETLGP GWSVINGAAV AFVLYILVYA YVSGGGSIMR
HTLLAVLGYE PSKLAAGLSF ALLLAACVWW GTWIVDRLSV IMMGGMVVSF ILSMSGMLSD
IRADVLFDAG GEGGSALFVW GALSTYLTSF CFHASVPSLV KYFGRRPADI NRCLMGGTGI
ALVCYLLWIV ACDGTIPRAE FRDVIAAGGN VGDLVRAAGS NLNSDFILRM LEAFSALAVA
TSFLGAGLGL FDYIADLCRF DDTRAGRTKT TLVTFGPPTV GGLLWPDGFL LAIGWAGLAA
TVWSVVVPAL MLRASRATRP APGYRVGGGS LTVPALLAFG LVTAVCHTLF VFGVLPMYR