Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0032 |
Symbol | |
ID | 4663097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 47604 |
End bp | 49127 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639818225 |
Product | NusB/RsmB/TIM44 |
Protein accession | YP_965483 |
Protein GI | 120601083 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGTC TGACCTCCGA CCTTCCCTGC CCGCAACCGG GCGTCCTCTT CCCGGACTTC GCCCCGGTGT TGCGAGACCG CAAACGCCTG TCGTGCGTCC CCCCTGCACG TGCCGGTGCA CTCGTCGCAC TGGATGCCGT CGTGCGCGCC GGTGTCGATG TGCAGGCCGC CCTAGACGAC TCTCTGTCGC ATGCCTCTCT TTCGCGTCAG GATGCCGCGC TCTGCACGGA GCTTGTCTAT GGCTATCTCA GGTCGGAAAT TCGTCTTTCA TGGCTTGTAC GGCGTTTTCT GAAGGCCCCT TCGAAGCTGC CCCCCGGCGT TCTGGCATTG CTCTGCCTTG CCGCCTACGA ACTCACCCAG TGTGACAGGG TGCCTGCGTA TGCCACCCTC GACTGGGCCG TATCCGCTGT CAGGGCACTC TATGGCACGG GTGTCTCACG CCTTGCCAAT GCAGTGCTGC GCAATGTGGA CCGGCTGGGC GATGTGTGGC GCGTAGCCGA CTTCTATGCG TGTGTCGCCG ATAACCGCGA CAGGCTGTGT GTAAGGCACT CCGCCCCGCG CTGGCTTGTC GACCTGTGGT GCGACGGATA CGGCGAGGAG AAGGCGACAG CCCTGCTGGA GGCCTCGCTG CTGCATCCCG CACCGGGCCT ACGCATCAAC CTCGCCCGTG CTGACGGTGC GGATTGTCTG CAACAACTCC TTTCCGGCAA CGTCGGGACA GGTAGGCAGG CTGCTGGAAA GGCCGGTGTC GTGTTCACCT CCGGAGGCAC ACCTTCCGAG GTGACTTCAC TCGTATCCGA GGGACGGGCT TCCCGGCAGA GTGGTGCTTC GCAGTCGGCC CTTGCGGCAC TTGAACCCGA GGTATGGCCG GGTCCCGTAT GGGACTGCTG TTGCGGACGG GGTGGGAAGA CTGCGGCGCT TGTTGAAACC GGGGTTGCGG TCGTTGCTGC ATCAGACCCC AGTATGAGCC GTCTGCGGGG GTTGCGCCGC GATTTCGCAA GACTCGGTCT TCCGGTGCCG CTTGCGGTGC GTGCCTCTGC TGTGCGCCCG CCTTTCAGTT GCGCCGCCAG CATGGCCCGG GCCGGGAGTT GTGGCGATGG CGGCAGCCCG CTTGCCATTG ATGGCATTGA AGTGGAGGTG TCCCGTGGGC AATCCGCGAC AGGGCTTGTC AACGCCTCTG GGCTGGGCAG CGGTGGTCTT TTCGGTACCA TCCTTGTGGA TGCCCCGTGC AGTGGGCTTG GCACGTTAAG CCGCAGGCCC GACATCAAGC GTAAGCGAAC CACGGCACAG ATTGCGGAAC TTGTTGCCCT TCAAGAGGCC ATTCTCGATG CCGTCTGGCC CTGTCTGCGT TCAGATGGCG TACTCGCCTA CATAACGTGT ACCCGCAATC CGCAAGAAAA CGAGTTGCGG ATTGCGGCAT TTCTTGAACG TCATCTGGAT GCGAGACTTG AAATCGCGTA CGAGACACCC CTTGAGGATG TCTCGCGCGA ATTCTTCTAT GCAGCCCGGT TGAGGAAGGC TTAG
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Protein sequence | MTSLTSDLPC PQPGVLFPDF APVLRDRKRL SCVPPARAGA LVALDAVVRA GVDVQAALDD SLSHASLSRQ DAALCTELVY GYLRSEIRLS WLVRRFLKAP SKLPPGVLAL LCLAAYELTQ CDRVPAYATL DWAVSAVRAL YGTGVSRLAN AVLRNVDRLG DVWRVADFYA CVADNRDRLC VRHSAPRWLV DLWCDGYGEE KATALLEASL LHPAPGLRIN LARADGADCL QQLLSGNVGT GRQAAGKAGV VFTSGGTPSE VTSLVSEGRA SRQSGASQSA LAALEPEVWP GPVWDCCCGR GGKTAALVET GVAVVAASDP SMSRLRGLRR DFARLGLPVP LAVRASAVRP PFSCAASMAR AGSCGDGGSP LAIDGIEVEV SRGQSATGLV NASGLGSGGL FGTILVDAPC SGLGTLSRRP DIKRKRTTAQ IAELVALQEA ILDAVWPCLR SDGVLAYITC TRNPQENELR IAAFLERHLD ARLEIAYETP LEDVSREFFY AARLRKA
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