| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0016 |
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| Symbol | |
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| ID | 4662653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 24392 |
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| End bp | 26431 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639818209 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_965467 |
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| Protein GI | 120601067 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.225702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAT CCACCGTCCT CGAACGTCTG CGTAGCCGCC TTGCCTCGCC ATGGTCGCTG
GTGCTTCTCG CCGCCTTGCT GGTGGCTGGC ATCGTGGCCG TCCTGCTGGG GTCGTATCAT
GGTGCGGCAT CGACCATGAC GCGCATCCTC ACTGAAAAGG GCGCGTCGCT CATCCGTTCG
TTCGAAGCGG GAGCACGTAC GGGCATGAGG CACAGTGCCG GGTTGCGCCT GCAGATACTG
CTTGAGGAGA TGGCAGACCA GCCTGACATC CGTTTCATCG CCGTGGTCTC GCCCGAGGGC
GAGGTGCTGG CGCATAGCGA CATGACCCGC GTGGGCACAC GCCTGTTCAA CCCTGACGAA
CTTCAGAGGC TGGATGCCGG GACAGAACCC CGCTGGACGC TCCTGCCCGG TGACGGTGGG
GACGATTTCG TGGTCTTTCG CCTGTTCGAC CCGGTGCGCC GCCGTGCCAT GTTCACACCC
GAAGGCGGGC GCATGGCCCC GCCTCCGCCA GACGATGCAA GGCTGGAGCA TCCCGACGAC
CAGCGGCCGC GTTCACGGGC GGAGCGTTTC GCCAGATGGC GCGAACGGCA AGAAGGCCTC
TCCCCCTTTC CGGGAAGCCT CCCCTTGCCG GAAGATGGTC GCGGAGACAC CGGCAGGCGT
GAACATGGCG GCCACGGGAT GCACGGCGGG TTCGACGCCT CGTGCATGCG AAGCCCGCAG
GGCCCTCCTC CGGTCATCCT CGTGGGGCTG GATATGCAGC CCTTTGCCGA GGCGCGCGCG
CAGGACCGCA ACCATGCCCT GCTCATGCTG GCACTGGCTG GTGGCGTAGC TGTCGCCGGG
GTCCTGTCGC TGGTGTGGTC ACGACGTGAA CAGGCGGCAC GGCGTCGGCT GATGGCGTCG
CAGGCGTTCG CGGCCAAGGT GGTGTCGAGC CTGCCTGACG GGCTTGTGGC CTTCGACCGC
GAAGGGCGCA TCGACGAATG CAACGCAGCC GGGGCCGACC TGCTGGGTGT CGGCGCTTCG
TCCGCACTGG GACAGGGCGC GTCATGGCTT CCTGCCCCGC TTGATGCCAT GGCCGCGTAT
CTTCTCGGTG GCGGTGTTCT CGCCCCCACC GAAGTGGAGT GCCGCCGTGC CGACGGAACG
AGCGTACCAC TGGGCGTGCG GGGCGCGCGC ATCGTGGACG ATGAAGGCCG TGCTGTGGGT
GTCATCCTGC TGTTGCGCGA CCTCAGCGAG GTGCGGCACC TTGAGGCGGA AGTGCGCAGG
CGCGAGAAGC TTGCAGCCGT GGGTAACCTT GCCGCTGGCG TCGCGCACGA GATACGCAAC
CCGCTCAGTT CGATAAAGGG CTACGCCACC TACTTCGGTA CGCGCTTCCC TGAAGGCAGC
GACGACCGTG AGGCCGCCCG CGTCATGGTG CAGGAGGTCG ACAGGCTCAA CCGCGTCATC
TCCGACCTCA TCGGCCTGTC GCGTCCATCC GACATCCGGC CCCGGCCCAC CCGTGTGGCG
GACATCGTCG ACCACGCCCT GCGACTGGTG CGTCCGGATG CCGAGGCCCG CAAAGTCGCC
GTGCGTTTCG AGGCCGCGCC GGATGTGCCC GAGGCCCTCG TGGACCCCGA CCGCTTCGCG
CAGGCGTTGC TCAATGTCTG CCTCAACGGC ATGGAGGCCA TGGGAGACGG GGGTGAGCTT
ATGGTGACGG CGTATCGCCA CGGTGATGGA AGGGTCGCGG TGTCGGTGCG CGACACCGGG
CCGGGCATCT CACCGGAGAA CCTGTCGCGG GTCTTCGACC CCTATTTCAC GACCAAGGGA
CAGGGCACGG GCCTTGGCCT CGCCATCGTC CACAAGATCA TCGAAGCCCA TGGGGGCGAG
GTGGGCTTCC GCTCCGAACC GGGGCACGGC ACCGAGTGCA CCTTCATACT GCCCGCTGTC
CATGCAGGGG CGACACCGGA CATCCGGGCC GATGCGGCAG GCGCGGGTAA GCCCCGTGCG
GCGACATCCG CGGGCATATT AGCGGGCACA CCCGATCAAG ACACGGACAA GGGGGAGTAG
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| Protein sequence | MTPSTVLERL RSRLASPWSL VLLAALLVAG IVAVLLGSYH GAASTMTRIL TEKGASLIRS
FEAGARTGMR HSAGLRLQIL LEEMADQPDI RFIAVVSPEG EVLAHSDMTR VGTRLFNPDE
LQRLDAGTEP RWTLLPGDGG DDFVVFRLFD PVRRRAMFTP EGGRMAPPPP DDARLEHPDD
QRPRSRAERF ARWRERQEGL SPFPGSLPLP EDGRGDTGRR EHGGHGMHGG FDASCMRSPQ
GPPPVILVGL DMQPFAEARA QDRNHALLML ALAGGVAVAG VLSLVWSRRE QAARRRLMAS
QAFAAKVVSS LPDGLVAFDR EGRIDECNAA GADLLGVGAS SALGQGASWL PAPLDAMAAY
LLGGGVLAPT EVECRRADGT SVPLGVRGAR IVDDEGRAVG VILLLRDLSE VRHLEAEVRR
REKLAAVGNL AAGVAHEIRN PLSSIKGYAT YFGTRFPEGS DDREAARVMV QEVDRLNRVI
SDLIGLSRPS DIRPRPTRVA DIVDHALRLV RPDAEARKVA VRFEAAPDVP EALVDPDRFA
QALLNVCLNG MEAMGDGGEL MVTAYRHGDG RVAVSVRDTG PGISPENLSR VFDPYFTTKG
QGTGLGLAIV HKIIEAHGGE VGFRSEPGHG TECTFILPAV HAGATPDIRA DAAGAGKPRA
ATSAGILAGT PDQDTDKGE
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