| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0011 |
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| Symbol | |
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| ID | 4662055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 16232 |
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| End bp | 18514 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639818204 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_965462 |
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| Protein GI | 120601062 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGG ACCTCATCAT CGTCGAATCT CCCGCCAAGG TGAAGACCAT CAAGAAATTC
CTTGGCGGCA AGTATGTCGT GCAGGCGAGC GTCGGTCACG TCCGCGACCT GCCCACCAAC
GAGATCGGCG TGGACGAGGC CAACAACTTC GCTCCGCAGT ACCGGGTCAT CGACGGCAAG
CAGAAGGTCG TCGACACGCT TCGCGAAGCG GCTGCGAAGG CAGACACCGT CTACCTCGCA
CCCGACCCGG ACCGTGAAGG TGAAGCCATC GCGTGGCATG TGGCCGCGCT CATCGAAGGC
AAGGCAGACA ACATCAAGCG CATCCAGTTC AACGAGATCA CCGCACGGGC CGTGCGCGAG
GCGCTGGAGA ACCCGCGCGA CCTCAACCGC GCCCTGTTCG ACGCCCAGCA GGCGCGCCGC
GTTCTCGACA GGCTGGTGGG CTACAAACTT TCGCCGCTGT TGTGGAAGAA GGTCAAGCGC
GGCATATCGG CGGGGCGTGT GCAGTCGGTG GCGTTGCGTC TCATCGTCGA CCGCGAGAGT
GAACGCCGCG CCTTCACACC TGAGGAATAC TGGCTGTTCC GCGCCATGTT CGCCAAGAAC
GTGCCCGGTG CAACGCCCAC AAGCCCCGAC CCGCAATACG CCCCCTTCAA GGCCGAACTC
GCGAAGATAG ACGGCAAGAA GGCCCATGTA GCCGACGCCG ACGCCGCCAA CGCCCTTGAA
GACGCCATGC GCGGCAAGCC CTTCGTCATC ACCGCCGTCG AACGCAAGAA GCGCGAACGC
CAGCCGCAGC CCCCGTTCAT CACCTCCACC TTGCAGCAGG CCGCCAACCA GCGACTGGGC
TATTCCGCCA AGCGCACCAT GAACATCGCG CAGCGGCTGT ATGAAGGTGT TGAACTGGGC
GAGATGGGTA CGGTGGCCCT CATCACCTAT ATGCGTACCG ACTCGGTGCG TGTCTCCGAC
GAGGCACGCG ACGCCGCACG CGCCTTCGTT ACCGAGACGT GGGGTGCCGA CTTCTGCCCG
GCCAAGCCCC GGCAGTTCAA GACCAAGGGC AGCGCGCAGG ACGCCCACGA AGCGGTGCGT
CCCGTCGATG TCAACGTGAC TCCCGACAGC GTGAAGCACC TGCTTCCCCC CGACCAGTTC
CAGCTTTACA GACTGGTGTG GTCGCGTTTC GTGGCCTCGC AGATGGCCCC GGCACGCTTC
GACGACACCA CCGTTGCCAT CGCATGCGGC CCCGCCGAAT GGCGCGCCAA GGGCGAACGG
ATGCTCTTTC CCGGTTTTCT CGCGGCCATG CCGCAGAAGG AGGAGGGCGA TGCTGAACTG
CCGCCACTGC AGGAGGGCGA GACCCTGCAC CCCGTCTCCG TCGAGAAGGA ACAGAAGTTC
ACGCAACCTC CGGCGCGCTA CACCGAAGCA TCTCTGGTGC GTGAACTCGA AGAGCGCGGC
ATAGGCCGTC CGTCGACCTA CGCCTCCATC ATCTCCACGC TCATCGACCG CGACTACACG
CGCCTCGAGG ACAAGCACTT CGTGCCCACC GACCTCGGGG CCACGGTGTG CGACCTGCTG
GCGCGCCACT TCACCACCCT CATGGATGTC GGGTTCACCG CCCAGATGGA GGACTCGCTC
GACAAGGTGG CAGAAGGGGG ACTCGACTGG GTCGAACTGC TTTCACGCTT CTCGGCCGAC
TTCAACCCCA CGCTGGAATC CGCTGCCAAG GCCATGGAGA CGGTGAAGGG CGGTCTGCCC
ACAAACGTCA CCTGCCCCGA GTGCGGCAAG CCCGTCGTGG TGAAGTTCGG CAAGGCAGGG
CCCTTCCTCG CCTGCACCGC CTACCCCGAC TGCAAGTTCA CCAGTAACTT CTCCCGCGAC
GAGAAGGGCG ACATCGTCAT CGAACAGCGG GCCCGCGAAG AGCTTGAAGC CGTAGGCACC
TGTCCCGAGT GCGGCAAGGA CCTCGTGGTC AAGAAGGCAC GTACCGGCAG CCGTTTCATC
GCGTGTACCG GCTACCCCGA CTGTCGCCAC ACCGAACCCT TCTCGACGGG CATCGCCTGC
CCGCGTGAAG GCTGCGACGG TCAACTTGTG GAGAAAAGCT CGAAGCGCGG CAAGATATTC
TACTCGTGCA ACCGCTTCCC CAAGTGCGAC TACGCACTGT GGGACTGGCC CGTACCCGGC
CCGTGCCCCG TGTGCGGGTC GCCGCTGCTG GTGAAGAAGA GCACCCGTGC CAAGGGCCTG
CACATCGCCT GCCCCGAAAA GACCTGTCGC TACACGCAGG AACTTCCCGA CGACGAAGGA
TAG
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| Protein sequence | MGKDLIIVES PAKVKTIKKF LGGKYVVQAS VGHVRDLPTN EIGVDEANNF APQYRVIDGK
QKVVDTLREA AAKADTVYLA PDPDREGEAI AWHVAALIEG KADNIKRIQF NEITARAVRE
ALENPRDLNR ALFDAQQARR VLDRLVGYKL SPLLWKKVKR GISAGRVQSV ALRLIVDRES
ERRAFTPEEY WLFRAMFAKN VPGATPTSPD PQYAPFKAEL AKIDGKKAHV ADADAANALE
DAMRGKPFVI TAVERKKRER QPQPPFITST LQQAANQRLG YSAKRTMNIA QRLYEGVELG
EMGTVALITY MRTDSVRVSD EARDAARAFV TETWGADFCP AKPRQFKTKG SAQDAHEAVR
PVDVNVTPDS VKHLLPPDQF QLYRLVWSRF VASQMAPARF DDTTVAIACG PAEWRAKGER
MLFPGFLAAM PQKEEGDAEL PPLQEGETLH PVSVEKEQKF TQPPARYTEA SLVRELEERG
IGRPSTYASI ISTLIDRDYT RLEDKHFVPT DLGATVCDLL ARHFTTLMDV GFTAQMEDSL
DKVAEGGLDW VELLSRFSAD FNPTLESAAK AMETVKGGLP TNVTCPECGK PVVVKFGKAG
PFLACTAYPD CKFTSNFSRD EKGDIVIEQR AREELEAVGT CPECGKDLVV KKARTGSRFI
ACTGYPDCRH TEPFSTGIAC PREGCDGQLV EKSSKRGKIF YSCNRFPKCD YALWDWPVPG
PCPVCGSPLL VKKSTRAKGL HIACPEKTCR YTQELPDDEG
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