Gene Dvul_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0008 
Symbol 
ID4664385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp11465 
End bp12718 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content60% 
IMG OID639818201 
Productpeptidase M23B 
Protein accessionYP_965459 
Protein GI120601059 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTGT CCGTCATGTT GCTTCGCTCG CCCTCCACCC CTCCTGAACT TCCTCAAGCC 
GACAATGGCA CTGTCTCCAT ATCGTCCAAT GCCACCGAAG CCGCTCCCGA AGCGACTGCA
GAGCAGCCCG AGAACCGTGT CGTGCGCGGT GTCGTCTCGC AAGGCGATAC GGCAGGTAAA
ATCCTGCAGG GATGGGTGAC CTCCAATCGT ACTCAGGCCC TTCTCGACGC CTGTCGCAAG
GTTTATTCGC TGGCCATGAT TCGCACCGGG CAACCCTACA CGGTCGTTGC CAATGCCACC
AACGGCAGTA TCGAACGTTT CGAATACGAG ATTGACGACG ACCGCAAGCT GGTCGTGAAC
GCCGATGAAG CCGGTGAGGG GTTCATCGCA CGGGTCGAAC CCATCCATTA CGAGTATGAA
CTCACGCGCG TCGATGCTGT CATCGACTCC AACCTGTTCC AGGCCGTGGC TGACGCCGGT
GAATCGCCGG GCCTTGCCAT CACCCTTGCC GACATCTTCG GCTGGGAAGT GGACTTCATC
CGCGACATAC GTGAGGGAGA CAGCTTCTCG GTACTGGTCG AGAAGCGTTA CCGTGATGGT
GATTTCAAGG GATATGGCAG GGTCATCGCC GCAACCTTCA CCAATCAGGG TGAGACCTAC
GAGGCGTTCT ACTTCACCGA CGATTTCGGA GGGCCCGCCT ACTACAACAA GGACGGGCAG
AGTCTGCGCA AGTCGTTCCT CAAGGCCCCG CTTTCCTTCA CCCGTGTGAC GTCGGGTTTC
TCGAAGAACA GGCTGCATCC CATCTTCATG GAACGCAGGC CCCACCCCGG TATCGACTAC
GCTGCGCCCA CCGGGACTCC CGTCAAATCG GTCGCCAACG GCGAGGTGAA ACAGGCGGGA
TGGGTGAACG GCTACGGCAA TCAGGTCATC GTGCGCCACG GCGGGAGAAT GGAGACGCTC
TATTCGCATC TCTCCGGCTT CGCCAAGGGC GTGCGCAAGG GGACCAAGGT ACGTCAGGGG
CAGGTCATCG GCTATGTCGG TGCCACCGGC TGGGCCACTG GGCCGCATCT AGACTTCCGC
ATCCGTCAGG GCGGGGATTT CGTGAACCCT GCCAAGATGA TGAACCCCCG CAGTGAACCT
GTGGCCAAGA AGCGCATGAA GGCTTTCGGT GACAGGGTCG CCTTCATACG CACCTTCATC
GATGGGACGC GTAACATCGC CGAGTACCGC AGGGACATGA TCCCCGACGT GTAA
 
Protein sequence
MAVSVMLLRS PSTPPELPQA DNGTVSISSN ATEAAPEATA EQPENRVVRG VVSQGDTAGK 
ILQGWVTSNR TQALLDACRK VYSLAMIRTG QPYTVVANAT NGSIERFEYE IDDDRKLVVN
ADEAGEGFIA RVEPIHYEYE LTRVDAVIDS NLFQAVADAG ESPGLAITLA DIFGWEVDFI
RDIREGDSFS VLVEKRYRDG DFKGYGRVIA ATFTNQGETY EAFYFTDDFG GPAYYNKDGQ
SLRKSFLKAP LSFTRVTSGF SKNRLHPIFM ERRPHPGIDY AAPTGTPVKS VANGEVKQAG
WVNGYGNQVI VRHGGRMETL YSHLSGFAKG VRKGTKVRQG QVIGYVGATG WATGPHLDFR
IRQGGDFVNP AKMMNPRSEP VAKKRMKAFG DRVAFIRTFI DGTRNIAEYR RDMIPDV