Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0008 |
Symbol | |
ID | 4664385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 11465 |
End bp | 12718 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639818201 |
Product | peptidase M23B |
Protein accession | YP_965459 |
Protein GI | 120601059 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGTGT CCGTCATGTT GCTTCGCTCG CCCTCCACCC CTCCTGAACT TCCTCAAGCC GACAATGGCA CTGTCTCCAT ATCGTCCAAT GCCACCGAAG CCGCTCCCGA AGCGACTGCA GAGCAGCCCG AGAACCGTGT CGTGCGCGGT GTCGTCTCGC AAGGCGATAC GGCAGGTAAA ATCCTGCAGG GATGGGTGAC CTCCAATCGT ACTCAGGCCC TTCTCGACGC CTGTCGCAAG GTTTATTCGC TGGCCATGAT TCGCACCGGG CAACCCTACA CGGTCGTTGC CAATGCCACC AACGGCAGTA TCGAACGTTT CGAATACGAG ATTGACGACG ACCGCAAGCT GGTCGTGAAC GCCGATGAAG CCGGTGAGGG GTTCATCGCA CGGGTCGAAC CCATCCATTA CGAGTATGAA CTCACGCGCG TCGATGCTGT CATCGACTCC AACCTGTTCC AGGCCGTGGC TGACGCCGGT GAATCGCCGG GCCTTGCCAT CACCCTTGCC GACATCTTCG GCTGGGAAGT GGACTTCATC CGCGACATAC GTGAGGGAGA CAGCTTCTCG GTACTGGTCG AGAAGCGTTA CCGTGATGGT GATTTCAAGG GATATGGCAG GGTCATCGCC GCAACCTTCA CCAATCAGGG TGAGACCTAC GAGGCGTTCT ACTTCACCGA CGATTTCGGA GGGCCCGCCT ACTACAACAA GGACGGGCAG AGTCTGCGCA AGTCGTTCCT CAAGGCCCCG CTTTCCTTCA CCCGTGTGAC GTCGGGTTTC TCGAAGAACA GGCTGCATCC CATCTTCATG GAACGCAGGC CCCACCCCGG TATCGACTAC GCTGCGCCCA CCGGGACTCC CGTCAAATCG GTCGCCAACG GCGAGGTGAA ACAGGCGGGA TGGGTGAACG GCTACGGCAA TCAGGTCATC GTGCGCCACG GCGGGAGAAT GGAGACGCTC TATTCGCATC TCTCCGGCTT CGCCAAGGGC GTGCGCAAGG GGACCAAGGT ACGTCAGGGG CAGGTCATCG GCTATGTCGG TGCCACCGGC TGGGCCACTG GGCCGCATCT AGACTTCCGC ATCCGTCAGG GCGGGGATTT CGTGAACCCT GCCAAGATGA TGAACCCCCG CAGTGAACCT GTGGCCAAGA AGCGCATGAA GGCTTTCGGT GACAGGGTCG CCTTCATACG CACCTTCATC GATGGGACGC GTAACATCGC CGAGTACCGC AGGGACATGA TCCCCGACGT GTAA
|
Protein sequence | MAVSVMLLRS PSTPPELPQA DNGTVSISSN ATEAAPEATA EQPENRVVRG VVSQGDTAGK ILQGWVTSNR TQALLDACRK VYSLAMIRTG QPYTVVANAT NGSIERFEYE IDDDRKLVVN ADEAGEGFIA RVEPIHYEYE LTRVDAVIDS NLFQAVADAG ESPGLAITLA DIFGWEVDFI RDIREGDSFS VLVEKRYRDG DFKGYGRVIA ATFTNQGETY EAFYFTDDFG GPAYYNKDGQ SLRKSFLKAP LSFTRVTSGF SKNRLHPIFM ERRPHPGIDY AAPTGTPVKS VANGEVKQAG WVNGYGNQVI VRHGGRMETL YSHLSGFAKG VRKGTKVRQG QVIGYVGATG WATGPHLDFR IRQGGDFVNP AKMMNPRSEP VAKKRMKAFG DRVAFIRTFI DGTRNIAEYR RDMIPDV
|
| |