Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0004 |
Symbol | |
ID | 4662043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 3444 |
End bp | 6014 |
Gene Length | 2571 bp |
Protein Length | 856 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639818197 |
Product | DNA gyrase, A subunit |
Protein accession | YP_965455 |
Protein GI | 120601055 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCGGG CCCCGCACGG GGCGCGTCGC CCCGGATCAA ACACAACGAG GCAGGCAGTG TCGGAACAGC AACAGATAAG CATCGAGAAG GAGCTCAGGA AATCGTACCT CGAGTACTCC CTGAGCGTCA TCATAGGTCG CGCCATCCCC GATGTGCGCG ATGGCCTGAA GCCCGTGCAC AGGCGCATCA TGTTCGCGCA GCACGAACTG GGCAACGCCT ACAACAGGCC GCACAAGAAG TCGGCGCGCA TCGTCGGTGA CGTCATCGGT AAATACCACC CGCATGGCGA CTCGGCGGTG TATGACGCCA TCGTGCGCAT GGCGCAGGAA TTCTCCATGC GCGACCCGCT GGTGGACGGG CAGGGCAACT TCGGTTCCAT CGACGGGGAC GCCGCGGCGG CCATGCGATA CACCGAAGTG CGCATGTCGC GTCTTGCGGG CGAGTTCATC GCGGATATCG AGAAGGAGAC GGTGGACTTC CGTCCCAACT ACGACAACAC CCTCCTCGAA CCCGTGGTGC TGCCCACGCG CGTGCCCAAC CTGCTGCTCA ACGGTTCGAC GGGCATCGCG GTGGGCATGG CCACCAACAT CCCGCCGCAC AACCTCGGTG AACTGTGCAA CGCCCTGCTG CACCTTCTCG ACGACGACGC CTGCACCATC GACGACCTGA TGGACCATGT GAAGGGGCCC GACTTCCCCA CGGGCGGTTT CGTCTACGCG GGGCAGGGCC TCGTTGACGC CTACACGACC GGGCGCGGTA CCGTGAAGGT GCGGGGCAAG GTCGAGATAG AAGAGCGCAA GAAGGGTTTT CAGGCCATCG TCATCCGCGA GATTCCCTAT GGCCTGAACA AGTCCAGCCT CGTCGAGAAG ATAGCCGCCC TCGTGAACGA GAGGCGCATC GACGGCGTGG CCGACCTGCG CGACGAATCG GACCGCAAGG GCATCCGCGT GGTCATCGAC CTCAAGCGCG GCACCATCCC CGATATCGTG GTCAATGCGC TGTACAAGTA CACCCCGCTG GAAAGTTCCT ACGGCATCAA CATGCTGGCG GTGGTGGACA ACAGGCCGCA ACTGCTCGAC CTGAAGTCGG CGCTGTCGCA CTTCCTCGAA CACCGTCGCG AAATCATCAT CCGCCGTACC CGCTACGACC TGCGCAAGGC CGAGGCGCGT GCCCATATCC TCGAAGGTCT GCGCATCGCG CTGGACAACA TCGACGAGGT GGTGGCCCTC ATCCGTGCTT CGGCGACCCC GCAGGAGGCC AAGGACAGGC TCATGCAGCG TTTCGGACTT TCCGAGGCGC AGTCGCAGGC CATCCTCGAC ATGCGGTTGC AGCGCCTGAC GAACCTCGAA CACGAGAAAC TGCTCGACGA GTATCGCGAA CTTCTGAAGA AGATCGAGTA CTTCCGTTCC ATTCTCGAGA ACATCGAGGT TCTGCGTCAG GTCATGCGCG AGGAATTCAC CGAGATACGC GATACCTACG CCACCAAGAG GCGCACCGAA GTGCTCATGG ACGAGCTTGA AGGCATCGCC ATCGAAGACC TCATCCCCGA CGACGACGTG GTCATCACCC TGTCGCGTCG CGGGTACATC AAGCGCACCA CGCTGGACAA CTACCAGCAG CAGCGCAGGG GCGGGAAGGG CATCGCCGGT CTGCACACCT CGGATGACGA CTTCGTGCAG GAATTCCTGA CCACCACGAA CCACCAGTAT CTGCTGCTGT TCACCAACCA CGGCAAGATG CATCAGCTGA AGGTGCATCA GGTGGCCGAG GGCAGCCGCA CGGCCAAGGG TGTGCACATC GCCAACCTGT TGCCGCTGGA GAAGGACGAA TGGGTCACCA CGGTGCTTTC GGTGCGCGAA TTCGCCGAAG ACCGCTTCTT CCTGTTCGTG ACCAAGCGCG GCATGGTCAA ACGGTCGTCG GCCTCGCTGT ACGCAAGGGC ACGCAAGGGC GGACTCATCG CCGTGGGCCT GCGTGATGAC GACGAACTCA TCATGGTGCG CGAGATACAC AACGACGACC ATGTGGTGCT CACCACGGGC GGCGGCATGG CGATACGCTT CGCCTGCCCT GATGTGCGCC CCATGGGTCG CAGTGCCACG GGCGTGAAGG GTGTGGCCCT TTCCGGTGAC GACAGGGTGG TCGCCTGCGC GGTCTTGCCG GGGGACGACA CCTCCACCGA AATCATGTCC ATCTCGTCCA ACGGCTACGG CAAGCGCACT CGCATCGAAC TGTACCGGCT GCAGTCCCGC GGCGGCAAGG GCGTGAAGAA CTTCAGGGTC ACGCCCAAGA CCGGTGATGT CATCGGTGCC ATGCCCGTGC GTGACGACGA GGCACTGGTA CTGCTCACCT CCACCAACAA GATCATCCGC ATGAGCGTCG ACGAGGTCCG TAGCGTGGGC CGTGCCACCA TGGGCGTCAT GCTCGTGCGG CTCGACGAAG GGGCCATCGT CGTCGGCTTC GACCGTGTGG ACGAGCGCGA AGTCGTTGAA GAGAGTGCCC CGGCGCAGTC TTCTGAACAG AAGACCGCAC CCGAAGGCGG AGACGCCGGA ACGGAAGGCA CTGCCGGGTA G
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Protein sequence | MERAPHGARR PGSNTTRQAV SEQQQISIEK ELRKSYLEYS LSVIIGRAIP DVRDGLKPVH RRIMFAQHEL GNAYNRPHKK SARIVGDVIG KYHPHGDSAV YDAIVRMAQE FSMRDPLVDG QGNFGSIDGD AAAAMRYTEV RMSRLAGEFI ADIEKETVDF RPNYDNTLLE PVVLPTRVPN LLLNGSTGIA VGMATNIPPH NLGELCNALL HLLDDDACTI DDLMDHVKGP DFPTGGFVYA GQGLVDAYTT GRGTVKVRGK VEIEERKKGF QAIVIREIPY GLNKSSLVEK IAALVNERRI DGVADLRDES DRKGIRVVID LKRGTIPDIV VNALYKYTPL ESSYGINMLA VVDNRPQLLD LKSALSHFLE HRREIIIRRT RYDLRKAEAR AHILEGLRIA LDNIDEVVAL IRASATPQEA KDRLMQRFGL SEAQSQAILD MRLQRLTNLE HEKLLDEYRE LLKKIEYFRS ILENIEVLRQ VMREEFTEIR DTYATKRRTE VLMDELEGIA IEDLIPDDDV VITLSRRGYI KRTTLDNYQQ QRRGGKGIAG LHTSDDDFVQ EFLTTTNHQY LLLFTNHGKM HQLKVHQVAE GSRTAKGVHI ANLLPLEKDE WVTTVLSVRE FAEDRFFLFV TKRGMVKRSS ASLYARARKG GLIAVGLRDD DELIMVREIH NDDHVVLTTG GGMAIRFACP DVRPMGRSAT GVKGVALSGD DRVVACAVLP GDDTSTEIMS ISSNGYGKRT RIELYRLQSR GGKGVKNFRV TPKTGDVIGA MPVRDDEALV LLTSTNKIIR MSVDEVRSVG RATMGVMLVR LDEGAIVVGF DRVDEREVVE ESAPAQSSEQ KTAPEGGDAG TEGTAG
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