| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0001 |
|---|
| Symbol | asnC |
|---|
| ID | 4663120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 339 |
|---|
| End bp | 1724 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639818194 |
|---|
| Product | asparaginyl-tRNA synthetase |
|---|
| Protein accession | YP_965452 |
|---|
| Protein GI | 120601052 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGGA CGCAGATCGT CGACGCCCTC GCTGCCACCG CGCCCCAGCC CGTGATTCGC
CTATGCGGCT GGGTGCGCAC ACGTCGCGAC GCCAAGGGCT TCTCCTTCCT CGAGATCAAC
GACGGCTCAT GCCTTGCGAA CATACAGGCC ATCGTGGATG AAGGCATTCC CGCCTATGCG
AACATCGGTG CCGTCAGCAC GGGTGCCGCC GTGGACATCA CCGGTGAGCT GGTCGAGTCG
CCCGGAAAGG GCCAGAAGTG GGAGGTACGT GTACAGACGC TGACCCTTCT CGGCGCAGCC
GACGCAGAGA CGTACCCCCT GCAGAAGAAG CGCCATTCCG ACGAATTCCT GCGCAGCATC
GCCCACCTGC GCGCCCGCAC GAACAAGTAC GGCGCAGCCT TCCGCATCCG TTCCGAAGCC
GCCTTCGCCA TCCATGAGTT CTACCGCGAA CGCGGTTTCT TCTACGTGCA CACGCCCATT
CTCACAGGGT CGGACTGCGA GGGTGCCGGG GAGATGTTCC GCGTGACCAC CCTGCCCGTG
GAGGGCAGTC CCACCCCCGC TTCGGGCAAC CGCTACGAGA ACGACTTCTT CGGCAAGGAA
TGCAACCTCA CCGTATCCGG GCAGCTTGAG GCCGAGACAC TGGCGCTGGG ACTCGGCAAG
GTCTACACCT TCGGCCCCAC CTTCCGGGCC GAGAATTCCA ATACGCCGCG CCATGCCGCC
GAATTCTGGA TGATCGAGCC CGAAGTCGCC TTCGCCGACC TCGAAGAGGA CATGAACCTC
GCCGAGGACA TGACACGCAC TGTGGTGCGC CGCATCCTCG ACCGTTGCGC CGCAGACCTC
GACCTGTTCA ACCGCTTTGT GGACACCACG CTCGTCGAAC GCCTGAGGCA GATTGCCGAT
GAACCCTTCG CCCGCTGTTC GTACACAGAG GCCATTGAAC TGCTTCTGAA GTCGGGCAAG
AAATTCGAAT ATCCGGTCTC CTTCGGGCTC GACCTGCAGA CGGAACATGA GCGCTATCTT
GCCGAGGAAC ACTTCGGCAA ACCGGTCATC GTCTACAACT ATCCCAAGGA GATCAAGGCG
TTCTACATGC GTCTCAACGA CGATGGGCGC ACCGTGGCAG CCATGGACGT GCTTGTACCC
CGCATCGGCG AACTCATCGG GGGCAGCCAG CGCGAAGAAC GCCTCGACGT GCTCGAAGCC
CGCATCAACG AGATGGGCCA GAATCTCGAA GACTATTGGT GGTATCTCGA CCTGCGCCGC
TTCGGCAGCG TCCCTCACGC CGGTTTCGGC ATGGGCTTCG AACGGCTGCT GATGCTGCTC
ACGGGCATCA CCAACATACG CGACGTCATT CCCTTCCCAC GCACACCGGG CAACCTCGAA
TTCTAG
|
|---|
| Protein sequence | MQRTQIVDAL AATAPQPVIR LCGWVRTRRD AKGFSFLEIN DGSCLANIQA IVDEGIPAYA
NIGAVSTGAA VDITGELVES PGKGQKWEVR VQTLTLLGAA DAETYPLQKK RHSDEFLRSI
AHLRARTNKY GAAFRIRSEA AFAIHEFYRE RGFFYVHTPI LTGSDCEGAG EMFRVTTLPV
EGSPTPASGN RYENDFFGKE CNLTVSGQLE AETLALGLGK VYTFGPTFRA ENSNTPRHAA
EFWMIEPEVA FADLEEDMNL AEDMTRTVVR RILDRCAADL DLFNRFVDTT LVERLRQIAD
EPFARCSYTE AIELLLKSGK KFEYPVSFGL DLQTEHERYL AEEHFGKPVI VYNYPKEIKA
FYMRLNDDGR TVAAMDVLVP RIGELIGGSQ REERLDVLEA RINEMGQNLE DYWWYLDLRR
FGSVPHAGFG MGFERLLMLL TGITNIRDVI PFPRTPGNLE F
|
|---|
| |