Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_3060 |
Symbol | |
ID | 4661963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008741 |
Strand | - |
Start bp | 142480 |
End bp | 143949 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639813980 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_961259 |
Protein GI | 120586914 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.329641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCACGT CCGGCTACTT CGCACGCAAT TCCGTCATCC GCATCGTGTC GTTCGCGGTG GGGGTGGGGT TCGCCCTGTT CGTGACCCCG GTGGTGGTGG GCACGCTGGG CAAGACGAAC TATGGCGTGT GGGTGCTGGT CAGTTCCGTG GCCTGCTACT TCCTGCTGCT CGAGGGCGGC GTGATGCAGG CCGTGTCGCG CCATGCGGCT GCGGCCCTTG CGCGTGACGA CCGGCACGAG GTCGACCGGG TGTGCACGGC GGGCTTCGCC CTCCATGCGC TGTCGTGCGG TCTGGCCCTG TGCGTGACCG GGGGGCTTGC GCTGTTCGCC GGTGTCTTCG CCTCCGACCA GCTGCCCGTG GAGAGGCTGC GCCAGTGCCT TGTCATCTAC AGCGTGTGCC TCTCGCTGTT CTTCCTGTTC AGGACGCACA CCGGGCTGCT CATGGCCGAG ATGCGCTGGA CGCTCATCGC CGTGCTGGCC ATGCTGCGCA GCGCGTTCAC CAGCCTTGCG GTGCTGCTCA TGATCACGCC GGAGAACGGC CTGTGGCTGC TGGCGGCGGT CAACGGCGGG GGCTTTCTGC TCGAAGGCGC GGCCTGCCTG CTCTTCGCAC GGCGCAGCGG GAGGGGGCGC GTGCGTGTGG CACTCTTCGA CGCCGCCCTC GCGCGTGAGC TTCTCGGCTA CGGCTGGGCC TTCACCGTGA CGCAACTGGG CGAGTCGATG CGCTACCGGT CGCAGAACTA CATCATCGCG CTGTTCTCGG GCGTGCGCGA GGTGGCCGTG TTCTCCATCG CCATGCAGTT CATCGGCTAC TTCCTGAGCC TCATGCAGAG CGCCTTCGGC ATCATGGTGC CGTACTTCAG CCGGATGCAG GCCCGCGGCG ACCGGGACGA CACCGCGGGT TCGCTGCTCT TCGCCCTGCG GCTGAGCTAT GTGACGGCCT CGTTCATCGG GCTGTGCCTC ATCTTCTACG GGCAGGAGTT CATCGTGCTG TGGCTCGGCC CCGGATTCGC CGAAGCCCAC GACGCCCTCG TGCCGCTGAC CATCGGGGCC GTGTTCTCGC TGGGGATGCT GCCCGCGGAC GGCTACCTGC TGGGGACGGC CCGTCACCGG ATGCTGGCCC GCTGCGCCAT GGCGGAGGGC GTCAGCATCG TACTGCTCTC GCTGGCGCTG GCGGGGCCCT TCGGCATGGA GGGCGTGGCA TGGGCCTATT GCGGCGTGGC CCTCGTCTTT CGCGCCGGGG TGGTGCCGTG GTTCGTCTTC ACGCAGGCGG GGCTTCCCCT TCTGGCCTAC GCGCGCCTGC TGGCGGAGGT GGCGGTCACG CATGTGGCCC CGCAGGTGCT CCTGTACCTG ATCATGCGGG GAACGCTCGG TACGGGTTAC CTGCAACTGG CCCTTCTTGC GGGAATGCAG GGTGTGCTCG CCGTGGGCAT CCAGTCATCC CTCCTGCGGT TCACGCGGGG TGCGGCCTGA
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Protein sequence | MGTSGYFARN SVIRIVSFAV GVGFALFVTP VVVGTLGKTN YGVWVLVSSV ACYFLLLEGG VMQAVSRHAA AALARDDRHE VDRVCTAGFA LHALSCGLAL CVTGGLALFA GVFASDQLPV ERLRQCLVIY SVCLSLFFLF RTHTGLLMAE MRWTLIAVLA MLRSAFTSLA VLLMITPENG LWLLAAVNGG GFLLEGAACL LFARRSGRGR VRVALFDAAL ARELLGYGWA FTVTQLGESM RYRSQNYIIA LFSGVREVAV FSIAMQFIGY FLSLMQSAFG IMVPYFSRMQ ARGDRDDTAG SLLFALRLSY VTASFIGLCL IFYGQEFIVL WLGPGFAEAH DALVPLTIGA VFSLGMLPAD GYLLGTARHR MLARCAMAEG VSIVLLSLAL AGPFGMEGVA WAYCGVALVF RAGVVPWFVF TQAGLPLLAY ARLLAEVAVT HVAPQVLLYL IMRGTLGTGY LQLALLAGMQ GVLAVGIQSS LLRFTRGAA
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