| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_3022 |
|---|
| Symbol | |
|---|
| ID | 4661933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008741 |
|---|
| Strand | + |
|---|
| Start bp | 84085 |
|---|
| End bp | 87390 |
|---|
| Gene Length | 3306 bp |
|---|
| Protein Length | 1101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639813942 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_961221 |
|---|
| Protein GI | 120586876 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGACGTT TCATGGATGC GCTACGTGAC CGTTTCACCC TCGACAGGCT GGTCTTCCCG
GTGCTGAGTG TCGTCGCCGC GGGGGTGCTC ATCACCACGA CGGTGGCCTA TCTCTATACC
AAGGCGACCG TCACCGACCT CGCCCACGGG CAGATAGCAC AGGCGCTGGC GTTCATCGAC
CGCGAGGTCT GCATGCAGGC CCGCGACATG GTCATGCAGA CCGAGTCCAT CGCGCGGGAA
GAGGTGCTCG TCCTCGCGCT GGAGAATTCG TATATCGGTC GTTCGGCCCG TGCCTCGGCA
CAACGCAAGC TCGATGCCTA TATCAGGAAC GGCACGTTCG ACCAGGTGTT CCTCTTCAAC
CTCGAGGGCG AGGCCATCCT CGCTGGCGAC CCTTCGCTGG CTGGCAGGGT CAACGTGGCT
GACAGGCGCT ACTTCAGCGA GGCGGCAGCG GGCCGTGCCG CCCTCGAGAC CGTGGTGGTG
TCACGTTCCA CCGGAAAACC GTCGCTCGTC ATGGCTTCGC CGTTGCGGGC CTTCGACGGA
ACGGTGGTGG GTGTCGTCGC CGGGGTTACC AACATCGAGA CGTTCGCAAA GGCCATTCTC
GAAGGTTCGC ACATCGGCCG TACGGGAGGC GCCTTCATCA CCGACACCGA TGGTGTCGTG
CTGGGGCTTC CGGCTTGGCT ATCTGCCGGG TCGCTCGGTC TGCATGAGGG GGGCGGCTTC
TCTGACGCGC ACGTCGCCGC GCTGAACCGC AGTGCCGAGA CGGGCGAGGT CTACCGGTTC
ACGCGAGGTG CAAACCAGAG GGCGAGTTAC ACCCGCCTGA ACGGTGCGAC GCACTGGCTG
CTGACCCTCG AGGCCGACGA GGGCGAAGTC CTCGCCCCGG CCCGCCGGCT GGCCGCCGTC
AGCGGTTCCA TCCTGCTTGT CACGCTCATC ACCGTCGCCC TCATCCTTGG CGTGTTGCGC
CGTGCCATGG TCAGCCTGCG CCATTCCGAG GCCGACCAGC GGACGCTGAC GGAACTCTCG
CCTGTGGGCA TCGTCACCTT CGACCCGGCA GGACGCCCCT CCTATCTGAA CAGGCAGGGC
CGCGACATCG CCGGCATGAC GGCGGACGAC CCGCTGCCCG CCTTCTTCGC ACTCGAAGAT
ACGGACGGCG GTTCGCTCAT CGGCGACGAT TCGCCCTTCG TGCGCGTGTT CCGCGAGGGG
CTGACCCTCA CCGATTTCGA GGCGTGGCTT CCCATGCCCG ACGGAACCCG GAAGCTGCTG
TCGGTGAACG CCACGCCGCT GGTGGTGGGG CGCGAACAGC GCAACCATGG CGTGGTGGCC
ACGTTCGAGG ACGTGACCGA ACGGCGCATG GCACAGGAAC GCCTGCAACA GTCCGAGAAG
CGTTTCGCCA CCCTGTTCCG CCTGTCGCCC GACAGCATCG TCCTCTCCGA CTTCGACACC
GGGCTGGTCG TGGATGTGAA CGATGCCTTC TGCCAACTGC ACGGTCTGGG GCGTGACGAG
GTGGTGGGAC GTTCGTTGCG CGACATAGGC CTTTACGACG ACCCCGCACA GCTTGATGGC
ATCATCAGCC TCGTCCGGGA GAAGGGCCGG GTGGTCGACC TCGAGTTGCG GGCCCGCAGC
CTGAAAGGAG AGGAACTCTA CCTTTCGCTT TCAAGTCAGC TCATGGTCAT CGGCGAGGCC
AACTATCGCC TTACCGTGGT CCGCGACATG ACGGAACGCT ACAGGGCCGA GCAGGAACTG
CGCGAGAAGC GCCTGCTGCT CGAGGGCATT CTCGATTCCG TCCCGGTCTC CATCTTCTGG
AAGGACGCGG CAGGCCGCTT CATGGGGTGT AACCGGACCT TCGCGCAGAT GGTGGGCCTC
GACACCCCCG AAACGGTCAT CGGCAAGGAC GACGCCGACC TGGGCCTGCT GCCGGGGCTG
GCAGAGACGT TCAGGGAAGC CGACAGGAAG GTGATGGCCA CGCTCTCGCC CATGCTCGGC
TATGTCGAAA GGCTGGCCTT CGCCGACGGG CGCGAGCGGA TGCTCGAGAC GAGCAAACTT
CCGTTGCTGG CTGCCGATGG CCGCGCCGTG GGGGTGCTCG GGCTCATCCG CGACATCACC
GAATCGCTTG CCGCGCAGGA GCAGTTGCGG CAGTCGGAGG AGCGTTTCTC GCGGCTGTTC
CGGTATTCGC CCGAGGCCAT GGCCCTCGTC GACATGGCCG ACCAGCGCTT CGCCGACGTG
AACCACGCCT TCGAGAGACT CACGGGTTAT GAGGCGTCTG AACTGGTGGG AAGAGGGACC
ATCGAGATGG CCTTCTACAC CGACGCCACA ACCCGTGCGG AGTTGCTGCG CCGCATTCAC
ACGGAGGGCT TCGTCGACAA TTACGAGTTC GAGGGGCGCA CCAAGGAAGG CACGCCCATG
CCCTGTTCCA TCTCGTGCAG CATCCTGTCC ATAGGCGACC GGCGGTTCAT CCTCGGCCTC
GTGCGCGACA TCACGGAGAT GAAGCGGATG CAGGAGGTCA TGATACAGAC GGAGAAGATG
ATCTCCGTGG GGGGCATCGC CGCCGGCATC GCCCATGAGA TAAACAACCC CCTCGGCATC
ATCCTGCAAG CCGCGCACAA CCTCGCGCAG CGGACACGGC CCGACTTCGC CAAGAACCTC
GACGTGGCGA CACGGGTCGG CCTCGATATG GACGCCCTGC GCCAGTACAT GGAGCAGCGC
AAGCTCGACG TCTTCATCGA AGACATCCGC GACGCGGCCG TGCGTGCCTC CGCCATCATC
CGGCACATGC TCGACTTCAG CCGTTCGGGC GGGTCAAAGC GTGTACCGTG CGATGTCACG
TCCATCCTCG ACAAGGCCGT GGCGCTGGCT GGCAGCGACT ACGACCTCAA GAAGAGCTAC
GATTTCAGGC GCATCACCAT CACCCGCGAC TACGAGGCCG GGCTCCCGCT TGTGGACTGT
TCGCCGACGG AACTGGAACA GGTGCTGCTG AACCTGTTGC GCAACGCCGC CCACGCCCTT
GCCGAGTCGC ACCGGGACGG CGAAGGACCG GCCATACACC TGCGGGTGCG ACGACAGGAC
GAGACCGTGG TCATCGACGT GCAGGACAAC GGCCCCGGCA TCCCGGTGGC GTTGCAGCGG
CGCATCTTCG AACCCTTCTA TACCACCAAG CCTCCGGGGG TTGGCACGGG GCTTGGTCTT
TCGGTATCGT ACTTCATCGT CACCAAGGGG CACGGCGGCA ACCTGACAGT GGTAACCCCG
CCCGAAGGTG GCACGCTCTT CCGCATCGAA CTTCCGTTGC AGGGCAGCAC AGAGGCGCAT
TCGTGA
|
|---|
| Protein sequence | MRRFMDALRD RFTLDRLVFP VLSVVAAGVL ITTTVAYLYT KATVTDLAHG QIAQALAFID
REVCMQARDM VMQTESIARE EVLVLALENS YIGRSARASA QRKLDAYIRN GTFDQVFLFN
LEGEAILAGD PSLAGRVNVA DRRYFSEAAA GRAALETVVV SRSTGKPSLV MASPLRAFDG
TVVGVVAGVT NIETFAKAIL EGSHIGRTGG AFITDTDGVV LGLPAWLSAG SLGLHEGGGF
SDAHVAALNR SAETGEVYRF TRGANQRASY TRLNGATHWL LTLEADEGEV LAPARRLAAV
SGSILLVTLI TVALILGVLR RAMVSLRHSE ADQRTLTELS PVGIVTFDPA GRPSYLNRQG
RDIAGMTADD PLPAFFALED TDGGSLIGDD SPFVRVFREG LTLTDFEAWL PMPDGTRKLL
SVNATPLVVG REQRNHGVVA TFEDVTERRM AQERLQQSEK RFATLFRLSP DSIVLSDFDT
GLVVDVNDAF CQLHGLGRDE VVGRSLRDIG LYDDPAQLDG IISLVREKGR VVDLELRARS
LKGEELYLSL SSQLMVIGEA NYRLTVVRDM TERYRAEQEL REKRLLLEGI LDSVPVSIFW
KDAAGRFMGC NRTFAQMVGL DTPETVIGKD DADLGLLPGL AETFREADRK VMATLSPMLG
YVERLAFADG RERMLETSKL PLLAADGRAV GVLGLIRDIT ESLAAQEQLR QSEERFSRLF
RYSPEAMALV DMADQRFADV NHAFERLTGY EASELVGRGT IEMAFYTDAT TRAELLRRIH
TEGFVDNYEF EGRTKEGTPM PCSISCSILS IGDRRFILGL VRDITEMKRM QEVMIQTEKM
ISVGGIAAGI AHEINNPLGI ILQAAHNLAQ RTRPDFAKNL DVATRVGLDM DALRQYMEQR
KLDVFIEDIR DAAVRASAII RHMLDFSRSG GSKRVPCDVT SILDKAVALA GSDYDLKKSY
DFRRITITRD YEAGLPLVDC SPTELEQVLL NLLRNAAHAL AESHRDGEGP AIHLRVRRQD
ETVVIDVQDN GPGIPVALQR RIFEPFYTTK PPGVGTGLGL SVSYFIVTKG HGGNLTVVTP
PEGGTLFRIE LPLQGSTEAH S
|
|---|
| |