Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_3010 |
Symbol | |
ID | 4661903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008741 |
Strand | + |
Start bp | 68637 |
End bp | 69452 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639813930 |
Product | type III secretion protein SpaR/YscT/HrcT |
Protein accession | YP_961209 |
Protein GI | 120586864 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4791] Type III secretory pathway, component EscT |
TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.100088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCTGG AGACGATACT CGACCAACTG GCCGTATACG ACCATATGCT GGCCCTGCTG GTGGGGATGC CGCGTCTGTT CGTCATCGCG CAGGTGGCGC CCTTCATGGG CGGCAACGTC ATCTCCGGGC AGTTGCGTCT GGTGCTCGTC TTCGCGTGCT ATCTGCCGCT GCACCCCGTC ATCGTGGGGC AGCTGCCGCA CGGGCACATC TTCGACCCCT CGCTCATGGG CCACTACGGT GCGCTGCTGC TCAAGGAGAC GCTGCTGGGG CTGCTGATGG GCCTTCTGGC GGGCATGGCC TTCTGGGCCG TGCAGAGTGC GGGCTTTCTC ATCGACAACC AGCGCGGCGC GTCCATGGCT GAAGAGTCCG ACCCCATGTC GGGTGAGCAG ACCTCGCCCA CCGGGGCCTT CCTGCTACAG GTGATGATGT ACCTCTTCTA CGCCAGCGGT GCCTTCGTGG CCTTTCTCGG GCTGCTCTAC ACCTCGTACG AGGTGTGGCC CGTGCCTTCG CTGACGCCGC TGTCGTGGCG GGCCGACCTG CCCCTGTACT TCGCCGGAAA GGTGGCGTGG CTCATGACCC ACATGCTGCT GCTGGCGGGG CCCATCATGG TGGCGTGCCT GCTGGCCGAC CTCTCGCTGG GTCTGGTGAA CCGCTTCGCC TCGCAGCTGA ACGTCTACGT GCTTGCCATG CCCGTGAAGA GTGCGGTGGC AAGCCTGCTT CTGCTGCTCT ACTTCGGGGC GCTGGTGGCC CATGCACCGG GGCTGTATGC CGACTTCGCG GGCGGCCTCG CCACGCTTCA GGGGCTGCTG CCATGA
|
Protein sequence | MTLETILDQL AVYDHMLALL VGMPRLFVIA QVAPFMGGNV ISGQLRLVLV FACYLPLHPV IVGQLPHGHI FDPSLMGHYG ALLLKETLLG LLMGLLAGMA FWAVQSAGFL IDNQRGASMA EESDPMSGEQ TSPTGAFLLQ VMMYLFYASG AFVAFLGLLY TSYEVWPVPS LTPLSWRADL PLYFAGKVAW LMTHMLLLAG PIMVACLLAD LSLGLVNRFA SQLNVYVLAM PVKSAVASLL LLLYFGALVA HAPGLYADFA GGLATLQGLL P
|
| |