Gene Dvul_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_3010 
Symbol 
ID4661903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008741 
Strand
Start bp68637 
End bp69452 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID639813930 
Producttype III secretion protein SpaR/YscT/HrcT 
Protein accessionYP_961209 
Protein GI120586864 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4791] Type III secretory pathway, component EscT 
TIGRFAM ID[TIGR01401] type III secretion protein SpaR/YscT/HrcT 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.100088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTGG AGACGATACT CGACCAACTG GCCGTATACG ACCATATGCT GGCCCTGCTG 
GTGGGGATGC CGCGTCTGTT CGTCATCGCG CAGGTGGCGC CCTTCATGGG CGGCAACGTC
ATCTCCGGGC AGTTGCGTCT GGTGCTCGTC TTCGCGTGCT ATCTGCCGCT GCACCCCGTC
ATCGTGGGGC AGCTGCCGCA CGGGCACATC TTCGACCCCT CGCTCATGGG CCACTACGGT
GCGCTGCTGC TCAAGGAGAC GCTGCTGGGG CTGCTGATGG GCCTTCTGGC GGGCATGGCC
TTCTGGGCCG TGCAGAGTGC GGGCTTTCTC ATCGACAACC AGCGCGGCGC GTCCATGGCT
GAAGAGTCCG ACCCCATGTC GGGTGAGCAG ACCTCGCCCA CCGGGGCCTT CCTGCTACAG
GTGATGATGT ACCTCTTCTA CGCCAGCGGT GCCTTCGTGG CCTTTCTCGG GCTGCTCTAC
ACCTCGTACG AGGTGTGGCC CGTGCCTTCG CTGACGCCGC TGTCGTGGCG GGCCGACCTG
CCCCTGTACT TCGCCGGAAA GGTGGCGTGG CTCATGACCC ACATGCTGCT GCTGGCGGGG
CCCATCATGG TGGCGTGCCT GCTGGCCGAC CTCTCGCTGG GTCTGGTGAA CCGCTTCGCC
TCGCAGCTGA ACGTCTACGT GCTTGCCATG CCCGTGAAGA GTGCGGTGGC AAGCCTGCTT
CTGCTGCTCT ACTTCGGGGC GCTGGTGGCC CATGCACCGG GGCTGTATGC CGACTTCGCG
GGCGGCCTCG CCACGCTTCA GGGGCTGCTG CCATGA
 
Protein sequence
MTLETILDQL AVYDHMLALL VGMPRLFVIA QVAPFMGGNV ISGQLRLVLV FACYLPLHPV 
IVGQLPHGHI FDPSLMGHYG ALLLKETLLG LLMGLLAGMA FWAVQSAGFL IDNQRGASMA
EESDPMSGEQ TSPTGAFLLQ VMMYLFYASG AFVAFLGLLY TSYEVWPVPS LTPLSWRADL
PLYFAGKVAW LMTHMLLLAG PIMVACLLAD LSLGLVNRFA SQLNVYVLAM PVKSAVASLL
LLLYFGALVA HAPGLYADFA GGLATLQGLL P