| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_3008 |
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| Symbol | |
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| ID | 4661915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008741 |
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| Strand | + |
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| Start bp | 66000 |
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| End bp | 68093 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639813928 |
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| Product | HrcV family type III secretion protein |
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| Protein accession | YP_961207 |
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| Protein GI | 120586862 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.181145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGC TCGCCCGCGC CAACACCGCC GTGGGGGCTG TCACCCGGCA CAACGACCTC
GCCATCGTGC TGCTGCTGGT GGTGGTCATC GCCCTGATGA TCCTGCCGCT GCCCACGCCG
CTGGTCGACA CGCTCATCGG CGCCAACATG GCGCTCTCGT TCGTGATGCT GATGATGTCG
ATGTACGTGA AGTCCATCCT CGACTTCTCG GTGTTCCCCA CCATGCTGCT CTTCACCACG
CTCTTCCGCG TGGGTCTCAA CATCACCACC ACCCGCCTCA TCCTGTTGCA GGCGGACGCG
GGCGAGATCA TCTTCGTCTT CGGTGAGTAC GCGCTCGGCG GCAACTTCGT GGTGGGCGCG
GTGGTCTTCG TCATCCTCAC CATCGTGCAG TTCCTCGTCA TCGCCAAGGG CGCGGAACGC
GTGGCCGAGG TGGGGGCGCG CTTCACGCTG GACGCCATGC CCGGCAAGCA GATGTCCATC
GACGCCGACA TGCGCGCCGG GGTCATCGAC ATGGAAGAGG CGCAGCGCAG GCGCAACACC
GTGTCGCAGG AAAGCCAGAT GTACGGCGCC ATGGACGGCG CCATGAAGTT CGTCAAGGGC
GACAGCATCG CGGGCATGAT CGTCGCGCTG GTCAACATCG TGGGCGGCAC GGTCATCGGC
ATCACGCAGC ACGGCATGGC GGCGGGCGAG GCGCTGCACA CCTACGGCAT CCTCACCATC
GGCGACGGTC TGGTCTCGCA GATACCCTCG CTGCTGGTGT CCATCTCCGC GGGCATCCTC
ATCACCCGGT CGGGCGATTC GGGCGGCAAC GTGGGGGCGC AGATAGGCGG ACAGATTTTC
GGCCAGCCCA AGGCCCTGCT CATGGCGGGG GGGCTGGTCT TCCTCTTCGC GCTGGTGCCC
GGCTTCCCCA AGCCGCAGCT GATGGGGCTG GCGCTGGCCC TCGGCGGTTT CGGCTACGTG
CTGCGCCGCA TGGCGGAGTT GCCCGCAGAG ACCGACCCGC GCGCCGAACT CTCGCGTTCG
CTGGCACCGG CGGTGAAGCC GCGCCCCGCA CGGGGCGGCG CACAGCAGGG CGACGACTTC
GCCCCCACCG TGCCCATCAT CCTCGACCTC TCTCCGGCCC TTGGCGAGAG CCTCGACTAC
GACTCGCTCA ACGATGAACT GGCGCGGCTG CGCCGTGCCC TGTACTTCGA CCTAGGGGTG
CCCTTCCCCG GCATCAACGT GCGCCCCAAC CCCGCGCTGC CGGGGCTGTG CTATGTGCTG
AACCTCAACG AGATACCCAT GTCGCGCGGG GTGCTCGAGA AGGGCATGAG CCTCGTGCGC
GACACCCGCG AGAACCTCGC CATGATGGGC GTCGCCGTGC GCGAGGGCGA ACGCTTCCTG
CCCGAGGTCG AACCGCTGTG GGTGCCCGAC GAGCAATGCC GCCTTCTCGA GAAGGCGGGC
ATCGGGCACA TGTCGCATGC GCGCATCCTC GCCTACCATC TCTCGCTGGT GCTTTCGCGC
CACGCCTCCA CCTTCATCGG CATGCAGGAA GCCAAGTACC TTCTCGACCG CATGGAGGAG
AGGGCACCCG ACCTCGTGCG CGAAGTCACC CGCCTGCTGC CCGTGCAGCG CATCGCAGAG
ATTTTCCAGC GGCTGGTGCA GGAACAGGTC TCCATACGCG ACCTGCGCAG CATCCTCGAG
GCGCTCATCG AATGGAGTGC CAAGGAGAAA GACACGGTCA TGCTCACCGA GTATGTCCGC
AGCGCCCTCA AGCGGCAGAT AAGCTACATG CACTCGCGGG GGCAGAACAT GCTGCCCGCC
ATCCTGCTCG ACCCCGGCGT GGAGGAGACC ATCCGCAAGG CCGTCCGGCA GACCTCCGCG
GGGGCCTTCC TCGCGCTGGA ACCCGCCGTG ACCGAACGGT TCATGAAGGC GGTGGCCGAT
GCCGCAGGGC CGTACGCCCA GCAGACGCAG AAGCCCGTCA TCATGACCTC GATGGATATC
AGACGGTATG TGCGGCGTCT CATCGAAGGC GACCACTACA CCCTCGCCGT CATGTCGTAT
CAGGAGCTTA CGCCAGAGAT TTCGGTGCAA CCCGTGAACA GGATACGCCT GTAA
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| Protein sequence | MSMLARANTA VGAVTRHNDL AIVLLLVVVI ALMILPLPTP LVDTLIGANM ALSFVMLMMS
MYVKSILDFS VFPTMLLFTT LFRVGLNITT TRLILLQADA GEIIFVFGEY ALGGNFVVGA
VVFVILTIVQ FLVIAKGAER VAEVGARFTL DAMPGKQMSI DADMRAGVID MEEAQRRRNT
VSQESQMYGA MDGAMKFVKG DSIAGMIVAL VNIVGGTVIG ITQHGMAAGE ALHTYGILTI
GDGLVSQIPS LLVSISAGIL ITRSGDSGGN VGAQIGGQIF GQPKALLMAG GLVFLFALVP
GFPKPQLMGL ALALGGFGYV LRRMAELPAE TDPRAELSRS LAPAVKPRPA RGGAQQGDDF
APTVPIILDL SPALGESLDY DSLNDELARL RRALYFDLGV PFPGINVRPN PALPGLCYVL
NLNEIPMSRG VLEKGMSLVR DTRENLAMMG VAVREGERFL PEVEPLWVPD EQCRLLEKAG
IGHMSHARIL AYHLSLVLSR HASTFIGMQE AKYLLDRMEE RAPDLVREVT RLLPVQRIAE
IFQRLVQEQV SIRDLRSILE ALIEWSAKEK DTVMLTEYVR SALKRQISYM HSRGQNMLPA
ILLDPGVEET IRKAVRQTSA GAFLALEPAV TERFMKAVAD AAGPYAQQTQ KPVIMTSMDI
RRYVRRLIEG DHYTLAVMSY QELTPEISVQ PVNRIRL
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