Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2981 |
Symbol | |
ID | 4661944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008741 |
Strand | - |
Start bp | 44039 |
End bp | 45355 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639813901 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_961180 |
Protein GI | 120586835 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCACA CCCGCGCCAC GCATCCCCAC CGCACCATGC CCGCCACGAA GCGGACATGG CCCGCGCTGG CGGGGTGCTG CGCGCTGGCG GTGCTGGTGC TCGGCCCGTG GGAGACGGTG ACGGCGGAGA CGGGACAGCC CGCACTGTAC GGCATCATCT CCGAAGAGGT GAACGTCTCT GAGCGCCAGC CCGTGCGCCT TGTGCCGCAT GGCCCCCTCG TGCGCGGTGC GACGCCCGGT GCGGGCGGTG TGCCCGATGA CTCCGATGTG CCCGGCGCAA ACGGCGCGGA CAAGACGAAC GGTACACCCG ATGCGTATGG TACGCCCCAC GCCAACAGTG GGCATGGTGT GCATGGCGTA GAGGGTGTGG GTGACACGGG TGGTGAGAAT GCAGCCACGG CCTCTGCCCG CGTCCCGGCG ACATCCGCAG ACGTCGCCTC CGGTCACGCC GAGACCACCA CCCCCCCGGA CACCGCCGGG GTGGTGTCGC AAACGGAAGT CCCGCAGCGA CCTGCCAGCC CGGTACGGCC GGACGCACAG ACCGCAACGC ACAGCCCTGC GCCATCCGGC ATCCCTCATG CCGTGGGCGA TGGGGCACGG GTCGCACCTT CGGGAATGGC GTCCGGCACC ACGACGTCCC AACCGTCCGG CCCGGCTGCA AGACCGGCGG ATGCCCCGGC AGCCGTGACG ACGGCAACGC CTGCGTCCGC AACACGTTAC GGTACGACTT CCGGCACGGT GCACACCCTC CCGTCCGTCT CGGAACACGC TACCGCGTCC GTCTCGCAAC ACGCTACCGC GTCCGCATCG CAGCACGCCA CACCCGCCGA GAACCTTCTC GACAGCATGG ATGTCTACGC CCTCTCGCCC CATGCGGCGC GCCTCGCCCT GCCGCGCATG GTGCCGGTGG TCGTGGCGGA ACGCCTGCGC GTGGTGCGCC CCGCCTTCCC CTTCTGGGAG ACCGCCATCG ACAGGGCCAG CCGCACCCAT GCCCTCGACC CGCGCCTCAT CGCGGCGGTC ATCAGGGCCG AATCGGGCTA CGACCCCGGC GCGGTCTCGC CCCGCGGGGC ACAGGGCGTC ATGCAGATCA TGCCCGCCAC GCAACGTGAA CTGGGACTCG ACGACCCCTT CGACCCCGAA GCCAACGTCG AGGCCGGAAG CCGCTACCTC CGGCAGCAAC TCGACCGCTT CGGCAGCCTC GAACTGGCGC TGGCGGCCTA CAACGCAGGC CCCGGCAACG TGCTGAAATA CGGCGGGATG CCCCCGTTCG ACGAGACCCG CACCTTCGTG CGGCGCGTAC TGGACGGCAT GCGATGA
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Protein sequence | MHHTRATHPH RTMPATKRTW PALAGCCALA VLVLGPWETV TAETGQPALY GIISEEVNVS ERQPVRLVPH GPLVRGATPG AGGVPDDSDV PGANGADKTN GTPDAYGTPH ANSGHGVHGV EGVGDTGGEN AATASARVPA TSADVASGHA ETTTPPDTAG VVSQTEVPQR PASPVRPDAQ TATHSPAPSG IPHAVGDGAR VAPSGMASGT TTSQPSGPAA RPADAPAAVT TATPASATRY GTTSGTVHTL PSVSEHATAS VSQHATASAS QHATPAENLL DSMDVYALSP HAARLALPRM VPVVVAERLR VVRPAFPFWE TAIDRASRTH ALDPRLIAAV IRAESGYDPG AVSPRGAQGV MQIMPATQRE LGLDDPFDPE ANVEAGSRYL RQQLDRFGSL ELALAAYNAG PGNVLKYGGM PPFDETRTFV RRVLDGMR
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