| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2976 |
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| Symbol | |
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| ID | 4661889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008741 |
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| Strand | - |
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| Start bp | 35626 |
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| End bp | 37425 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639813896 |
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| Product | CRISPR-associated RAMP Csd1 family protein |
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| Protein accession | YP_961175 |
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| Protein GI | 120586830 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01863] CRISPR-associated protein, Csd1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.952495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCTGC AGGCATTGCA TGGCTATTAC CAGCGCATGA GCGCAGACCC CGATGCGGGG
ATGCCGCCCT ACGGGACCAG CATGGAGAAC ATCTCGTTCG CGCTGGTGCT GGATGCGAAA
GGGACGCTAC GGGGCATCGA GGACTTGCGG GAACAGGACG GCAAGAAGCT GCGACCCCGC
AAGATGGCCG TGCCCGCTGC CGTGACCAGG ACATCGGGCG TGAAGGCCAA CTTCTGCTGG
GACAAGACCG CCTACGTTCT GGGCAACGAC GCCAACGGCG CTGCGAAGAA TGCCGAGCGG
TTTGCCGCCT TCAGGGAGTT GCTCACTGCC GTATGCGCCG ATGTCGATGA CGAGGGCTTT
AGGGCAGTTA CGCGCTTTCT GGACACATGG GACCCGGAAC AGGCGGCGCA AGTAGTGGCC
GCCCTGCATG ACTGGGACGA CATCGTCCCG GCCAATCTGG TCTTTCGTCT TGAAGGGACA
AAAGGCTTCA TACATGACCG CCCCGCTATC CAGAAGGCAT GGTCTGCCTT TTGTGCCAAT
TCCGACAACA GCCCAAAGGG CCGTTGCCTG ATCACAGGTG AACGAGATGT CGCACAGGCA
CTGGTACACA CACCCATCAA GGGTGTGGCA GGCGGACAGA CATCGGGCGG CTACATCGTG
TCGTTCAACG CCCCGGCATT CGTATCCTAC CACAAGGACA AGGCCGACGT CGGAGAGGTT
GCCGCCTTCG CCTATACCAC GGCACTGAAC ACCCTGCTTG CCCGAGGCAG CCGCCAGCGG
GTCCCCATCG CTGACGCCAC CGTGGTCTTC TGGGCCGAAC GCAGCAGCCC GGCAGAGGAC
ATCTTTGCAG GCATGTTCGA CCCGCCTTCC ACCACGGCGA AACCGGAGTC CTCGAACGGG
ACGCAGCCGG AAGACAGTGA AGAAGGCAGC CAGCCTGACA CAACCAGAGA CGACCCCCAT
GCCGCTGCCA GAATGCACGA CCTGCTTGTG GCCATCCGTT CCGGCAAGCG CGCCACAGAC
ATCATGCCCG ACATGGACGA GTCTGTGCGC TTTCATGTGC TTGGCCTGTC GCCCAATGCC
GCCCGCCTGT CCGTCCGCTT CTGGGAGGTC GATACCGTCG GTCACATGCT GGACAAGGTG
GGGCGGCACT ACCGTGAACT CGAGATTGTC CGGCAGTACG ACAACGAGCC GGAATTCCCC
CCGCTGTGGC TGCTGCTTCG CCAGACCGCA GCACTGAACA AGACCGAGAA CATCTCGCCT
GTACTTGCAG GCGGGCTGTT CAGGGCCATG CTCACCGGCG GCCCCTACCC GCAAAGTCTG
CTGCCCGCCG TGCTTGGACG CATCCGCGCC GAGCACACGG TGACATACTA CCGTGCCGCG
CTCATCAAAG CGTATCTCAT AAGAAACAGA AAGCTGGAGG TGCCCGTGTC TCTCGACCCC
GCAAGAACAG ACCGCCCGTA CCTGCTCGGA CGACTCTTCG CCGTTCTGGA AAAAGCGCAG
GAAGATGCCG TGCCCGGTGC GAACGCCACC ATCAAGGACC GCTATCTGGC CTCCGCATCG
GCCAATCCGG GGCAGGTCTT CCACATGCTG CTCAAGAATG CGTCCAACCA CACGGCCAAA
CTCCGCAAGG ACCCTGAAAG AAAGGGGTCG GCCATCCACT ACGAAATCAT GATGCAAGAG
ATCATCGACA ACATCAGCGA TTTTCCGGTG ACCATGTCGT CCGACGAGCA AGGCCTGTTC
ATGATCGGCT ACTACCACCA GCGCAAGGCC CTTTTCACCA AGAAGAACAA GGAGAACTAG
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| Protein sequence | MILQALHGYY QRMSADPDAG MPPYGTSMEN ISFALVLDAK GTLRGIEDLR EQDGKKLRPR
KMAVPAAVTR TSGVKANFCW DKTAYVLGND ANGAAKNAER FAAFRELLTA VCADVDDEGF
RAVTRFLDTW DPEQAAQVVA ALHDWDDIVP ANLVFRLEGT KGFIHDRPAI QKAWSAFCAN
SDNSPKGRCL ITGERDVAQA LVHTPIKGVA GGQTSGGYIV SFNAPAFVSY HKDKADVGEV
AAFAYTTALN TLLARGSRQR VPIADATVVF WAERSSPAED IFAGMFDPPS TTAKPESSNG
TQPEDSEEGS QPDTTRDDPH AAARMHDLLV AIRSGKRATD IMPDMDESVR FHVLGLSPNA
ARLSVRFWEV DTVGHMLDKV GRHYRELEIV RQYDNEPEFP PLWLLLRQTA ALNKTENISP
VLAGGLFRAM LTGGPYPQSL LPAVLGRIRA EHTVTYYRAA LIKAYLIRNR KLEVPVSLDP
ARTDRPYLLG RLFAVLEKAQ EDAVPGANAT IKDRYLASAS ANPGQVFHML LKNASNHTAK
LRKDPERKGS AIHYEIMMQE IIDNISDFPV TMSSDEQGLF MIGYYHQRKA LFTKKNKEN
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