| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2966 |
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| Symbol | |
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| ID | 4661974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008741 |
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| Strand | + |
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| Start bp | 21064 |
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| End bp | 22611 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639813886 |
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| Product | transcriptional regulator NifA |
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| Protein accession | YP_961165 |
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| Protein GI | 120586820 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATGCA CCGTACACGC TCTCAAACTC AAGGCCCTGC GCGCCATCAG CAACGTCATC
GACCGGGCGT TGCAGCTTGA GGACGCCCTC ACCGAGACCT TGCGCGTGCT GGCAGAGACC
CTCGCCATGC AGCGCGGCAC CATCACGCTG CTGGACGGCG AGACGGGGCA ACTGGTCATC
GCGGCGTCGC ACGGCCTCTC GCGCGAGGAA CAGGAACGCG GCGTCTACCG CCTCGACGAG
GGGGTGACGG GCACCATCTT CAGCACCGGG CGGCCCTACC TCGTGCGCGA CGTGCGCAAC
GACCCGCTCT TTCTCGACCG CACCGGGGCA CGCCGCGTGG AACGCGGCAA GGTCTCGTTC
CTCGGGGTGC CCATCCTCAG CAAGGGGCGG CCCGTGGGCG TGCTGAACGT GGACAGGCTG
TTCGGTGACG CGGTCTCCTG CGCCGAAGAC ATCGAGTTCC TCGAAGTGGT CGCCACGCTG
GTGGCGCAGT TCCTGAGCCT CAACGAGCAG GTCGCCGCCC GCGAACGCGC CCTGCGGCGC
GAGAACATGC AGCTGCGGAC GCGGGTGCTC GATTCGCGCG GCGACTTCAT CGTGGGGCGC
AGCGGCGCCA TGGCAGAGGT GCAGCGCTAC ATCCAGCGGG TGGCGGGCAC GCGGGCGACG
GTGCTGCTGC TTGGCGAGTC CGGGGTGGGC AAGACGCTCA TCGCACGGCT GGTGCATACG
CTGTCAGAGC GCGAGCATCA CCCGTTCATC AAGGTCAACT GCGCCTCCAT CCCCGAATCG
CTGCTCGAGG CCGAGCTTTT CGGGCACGAG AAGGGCGCGT TCACCGGGGC TGTCTCCGCC
CGTATGGGCC GCTTCGAAGA GGCGCACGAG GGCACGGTCT TCCTCGACGA GATCGGCGAG
TTGCCGCCCG GTATTCAGGC CAAACTCTTG CGGGTGTTGC AGGAACGCGA GTTCGAGCGG
CTTGGCAGCA ACAGGACGCG CCGGGTCAAC GTGCGCATCG TGGCTGCCAC CAACCGCGAC
CTCGCGGCGC AGGTGGATGC CGGAAGGTTC AGGCAGGACC TCTACTACCG CCTGTGCGTC
TTCCCCATCC GGGTGCCGCC CCTGCGCGAA CGCCCCGAGG ACATCACCGG GCTGCTCAAC
CACTTTCTCG CCAAGGTCGC CCGCGAATAC GGGCGCAGCC TCGTGCTGGC ACCCGATGCG
CTCGAGCTTC TGCAACGCTA CGCATGGCCC GGCAACGTGC GCGAGATGGA GAACCTCATC
GAACGCATGG CCATTCTCAC CGACGGCACG CTGGCGGACA GACGCTTCGT CGAATCGCTG
CTCGAACAGG CACCCGCGGG CGATGACGGG CAGATGCGGG CGGGGCTTGC CGTGCCGCCC
TCGCTACGCG AGGTCGAACA GGGCGAGTTG CTGGCGGCGC TGCGGCGCAA CGGCTGGATA
CAGCACAAGG CCGCCCGTGA ACTGGGCCTC ACGCCACGGC AGATGGGCTA CCGCATCCGC
CAGTGGGGGC TTGCGCCGCT GGTGGCGTCG GAACGCGCCA AGGGGTAG
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| Protein sequence | MTCTVHALKL KALRAISNVI DRALQLEDAL TETLRVLAET LAMQRGTITL LDGETGQLVI
AASHGLSREE QERGVYRLDE GVTGTIFSTG RPYLVRDVRN DPLFLDRTGA RRVERGKVSF
LGVPILSKGR PVGVLNVDRL FGDAVSCAED IEFLEVVATL VAQFLSLNEQ VAARERALRR
ENMQLRTRVL DSRGDFIVGR SGAMAEVQRY IQRVAGTRAT VLLLGESGVG KTLIARLVHT
LSEREHHPFI KVNCASIPES LLEAELFGHE KGAFTGAVSA RMGRFEEAHE GTVFLDEIGE
LPPGIQAKLL RVLQEREFER LGSNRTRRVN VRIVAATNRD LAAQVDAGRF RQDLYYRLCV
FPIRVPPLRE RPEDITGLLN HFLAKVAREY GRSLVLAPDA LELLQRYAWP GNVREMENLI
ERMAILTDGT LADRRFVESL LEQAPAGDDG QMRAGLAVPP SLREVEQGEL LAALRRNGWI
QHKAARELGL TPRQMGYRIR QWGLAPLVAS ERAKG
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