Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_3894 |
Symbol | trmE |
ID | 4654674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 4322679 |
End bp | 4324049 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639813870 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_961149 |
Protein GI | 120556798 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCAG CGACTGACAC CATTGCCGCC ATCGCCACTG CCCCGGGCCA GGCCGGGGTG GGGATTGTCC GGGTGTCCGG ACCCAGGGCC ATGGCCATTG CCCGCACCAT GCTGGGCTTT GAGCCAAAAC CCCGATACGC CCACTACGGC CCGTTCCGGG ATCGTCAGGG AGAGCTGATT GATGAGGGCA TCGGTCTGTA CTTTCCCAAC CCGCACTCCT TTACCGGCGA GGATGTGTTC GAGCTTCAGG GCCATGGCGG CACGGTGATT CTGGATATCC TGTTACGGGA AGTCTGCAGC CTGGGGGCCC GGCTGGCCCG GCCTGGTGAA TTTTCCGAAA GAGCGTTTCT CAATGACAAA CTGGACCTGG CCCAGGCTGA GGCCATTGCT GATCTGATTG AAAGCAGTTC GGAACAGGCG GCCCGCTGTG CCGTGCGTTC CATGCAGGGG GTGTTCTCCA AACGTGTGGA TAACCTGGTG GAGGCCATCA CCCATCTGCG CATCTACGTG GAAGCGGCCA TCGATTTTCC GGAGGAAGAG ATCGATTTCC TGGCCGATGG CAAAGTTGCT TCTGACTTGC AGGGCCTGCT GGAGCAGGTG CAGCAGATTC TCGGTGAAGC CCAGCAAGGC ACCATTCTGC GGGACGGCAT GAAAGTGGTT ATTGCCGGCC GGCCCAATGC CGGCAAATCC AGCCTGCTGA ACGCCCTCGC GGGGCGGGAG GCTGCGATTG TCACCGCCAT CGAGGGCACA ACCCGGGATG TGTTGCGGGA ACATATCCAC ATCGATGGTA TGCCGCTGCA CATTATTGAT ACCGCCGGCC TGCGGGACAG CCCGGACGAA GTGGAACAGA TTGGTATTGC CCGGGCCTGG GAAGAAATCC GACAGGCCGA TCGTATTTTG CTGATGGTGG ATGCCACCAC CACCGACAAA ACCGAGCCCC ATGAAATCTG GCCGGATTTT ATTGATCAAC TGCCCAGGAG TGCACCGGTG ACGGTGATCC GGAACAAGGT GGATCTGTCT GGTGAACCGT TGGGTATCAG CGCCGAGTCG CATCAGACCG CTCCGGTGAT TCGTCTGGCA GCAAAAGCTG CGGAGGGTCT GGAGGTTCTG CGTGAGCATC TGAAAGAATG CATCGGCTTT GCCAGCACCA CCGAAGGTGG CTTCCTGGCC CGGCGCCGGC ACCTGGATGC CCTGGAACGT GCCCGGGATT CCCTGCTGCA AGGCCAGACT CAGCTGGAAG GTTACGGCGC CGGTGAATTG CTGGCCGAAG ACCTCCGGGC CGCTCAGGAT GCCCTGGGGG AAATCACCGG GCATCTGACC CCGGATGAGC TTCTGGGGAA AATATTCAGC AGTTTCTGCA TCGGGAAATA A
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Protein sequence | MQPATDTIAA IATAPGQAGV GIVRVSGPRA MAIARTMLGF EPKPRYAHYG PFRDRQGELI DEGIGLYFPN PHSFTGEDVF ELQGHGGTVI LDILLREVCS LGARLARPGE FSERAFLNDK LDLAQAEAIA DLIESSSEQA ARCAVRSMQG VFSKRVDNLV EAITHLRIYV EAAIDFPEEE IDFLADGKVA SDLQGLLEQV QQILGEAQQG TILRDGMKVV IAGRPNAGKS SLLNALAGRE AAIVTAIEGT TRDVLREHIH IDGMPLHIID TAGLRDSPDE VEQIGIARAW EEIRQADRIL LMVDATTTDK TEPHEIWPDF IDQLPRSAPV TVIRNKVDLS GEPLGISAES HQTAPVIRLA AKAAEGLEVL REHLKECIGF ASTTEGGFLA RRRHLDALER ARDSLLQGQT QLEGYGAGEL LAEDLRAAQD ALGEITGHLT PDELLGKIFS SFCIGK
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