| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3888 |
|---|
| Symbol | |
|---|
| ID | 4654668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 4313857 |
|---|
| End bp | 4317003 |
|---|
| Gene Length | 3147 bp |
|---|
| Protein Length | 1048 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639813864 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_961143 |
|---|
| Protein GI | 120556792 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.471381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCTGT CCGATGTCTC CATCAAACGC CCGGTGTTTG CCACCGTTCT GAGCCTGCTG
ATTGTCGTAT TCGGCGTGGC CGCCTTGCTG GGCTTGCCGG TTCGGGAATA TCCGGATATT
GATCCGCCGG TGGTTTCGGT GTCCACCGAT TACACCGGCG CTGCGGCGGA AGTGGTCGAC
ACCCAGATTA CCCAGGTGAT TGAAGGGGCC ATCAGTGGCA TTGAAGGCAT TCGCTCCATC
GAATCCTCAA CCGAACAGGG TGAATCCCGA ACCTCCATAG AATTTGATAC CTCCCGGGAT
GTCGACATTG CCGCCAACGA CGTACGCGAT GCGGTGTCCC GGGTTCTGAA CCAGTTGCCG
GATGAGGCCG ATCCCCCGGT GGTTCAAAAA GCCGATTCCG ATGCCCGGCC AATGATGTGG
ATAACTCTGA TCAGTGACGT CTGGGACAGT GCCGAACTCA GTGACTTCGC CGATCGGGTT
CTGGCAGACC GGTTATCGGT TCTGGACGGT GTTGCCGATG TCCGGATTGG CGGTGAACGC
CGTTACGCCA TCCGGGTCTG GCTCGACCGC ACCCGCCTGG CGGCCCGCAA CATAACCGTT
GCCGAGGTGG AGCAGGCACT GCGGCAGAAC AACGTGGAGT TACCGGCCGG TTCAGTGGAC
TCCTCCACCC GCAACTTTAC CGTGCGCGCG GAAGGGCGGT TGTCCAATGT GGAAGATTTC
CGCAATCTGG TGATCCGCCG GGATGGCAAC GACCTGTTGC GCCTGGGCGA GGTTGCCAAT
GTTCAGGTCG GGGTGGAATC GGATGTTGGT CGTTTGCGGG CCAATGGCGA AACCGCTATC
GGGATGGGGG TAATCCGCCA GTCCAAGGCC AACACGGTAG CGGTGTCGGA TGCGGTGAAG
GCGGAGCTGG TGAAGATTCG CGAGACCTTG CCGCCGGAAG TGCGTATTGC CGAGAGCTAT
GACGAATCGG TGTTTATCCG GGCTTCGATC AAAGAGGTTC TGACCACGCT GGCGATTGCG
GTATCGCTGG TGATACTGGT TATTTTCCTG TTCCTGCGCT CCTGGCGCGC AACCCTGATT
CCGGCGGTCA CCATTCCGGT GGCGGTGATC GGTGCGTTTA TTGGCCTGGG TTTCCTGGGC
TTTTCCATCA ACGTACTTAC CCTGTTGGCC ATCATTCTGG CCATCGGCCT GGTGGTGGAC
GATGCCATTG TCATGCTGGA GAACATCCAG CGTCGAATTG ATGAAGGCGA ACCACCGTTG
CTGGCGGCCT ACCGGGGCGC CAAGCAGGTG GCTTTCGCGG TGATCGCCAC CACGCTGACT
CTGGTGGCGG TGTTTGTGCC CATCTCGTTC ATGGGCGGCA ACGTGGGCCG GTTGTTTGCG
GAATTCGGCT TCACCCTGGC GGCCGCCGTG GTGGTCTCCA GCCTGGTCGC TCTGACCCTG
GCGCCGATGC TCTGCTCCAA GTGGCTCCGG CACAGTCCCG ACAGTGCCGA GGGGCATCGA
CTCTGGGCCT TCAGTGAACG CATCCTGAAT GGCCTGACGA ATGGCTATCA GAGAATGCTT
CGCTTCTCCC TGAACCAACC GGGGCTGTTG CTCGGGCTCG GTATCGTCGG GCTGATCGTG
GCGGTGGTGA TTTTCCCTCG GTTGCCCCAG GAACTGGCCC CGACCGAAGA CCGCGGCGTA
ATCATCATGC CCGTCAGCGC ACCCCGGGGT TCGACGGTTG AATTCACCGA TCACTTTGTC
AAACAGGCCG AAGAGCGACT GTTGCCCTAC CTGGATGACG GTATCGCCGA GCGTTTCCTG
TCCATCGTCG GATTCCGGGA TGAAGAAGAC AATGCCTTCA TGATCATGGG GCTGGTGCCC
TGGGAACAGC GGGATATCAA GCAGCAGCAG GTCACCACCG AGATTCGTGA CAAGCTGTCT
GACATTTCCG GGGTGCGGAT CAGTGTCATC AACCCGCCGG GGCTGGGCCA GCGCGGCTTC
AATCAGCCGG TGGAGTTTGT CATTGCCGGC CCGGACTATG AGTCGGTGCA GGCCTGGAGT
GAGGAGATCG TTGAACGGGC AAAGGAAAAC CCGAATCTGC TGAATGTCGA CACCGATTTT
GAGCTGACCC GGCCGGAACT GAAGGTCAAT ATTGACCGCG ACCGGGCAGC GGATCTGGAT
ATCACCATTG AAGACGTAGG CCTCACCCTG CAGACCATGC TGGCTTCCCG GCAGGTAACC
ACCTATCTGG ATCGGGGCCG GGAATACGAC GTCATTATCC AGGCGGACGA TGCCGACCGG
GCCACGCCCG GTGATATGGA GCAGATCTTC CTGCGGCCTC GGGCAGGTGG GGAACTGATT
CCACTCAAGG CCCTGGTATC TGTGGAAGAG ATCGGGGCCA ATCCGGATCT GCGCCGGATT
GACCGGCTGC CGGCGGTGGT GGTGAGTGCG TCCCTGGCCG AGGGCTATGA CCTGGGTTCA
GCGCTGACCT ACCTGAATAA CCTGGCTGTG GATAACCTGC CGCCGGAGGC CCGGCTCAGT
TACAAGGGCC TGTCCCAGGA ATTCCAGGAT TCATCGGCGG CCATCTACCT GACCTTCGGG
CTGGCGTTTA TTATCGTGTT CCTGGTGCTG GCGGCCCAGT TCGAGAGCTG GATCCACCCG
CTGATTATCA TGCTGTCGGT GCCGCTGGCG GTGACCGGTG CGCTGATCGC GCTGGCCTGG
TCGGGCATCA GTCTGAACAT CTACAGCCAG ATTGGCATCA TTATGCTGCT GGGACTGATG
GCCAAGAACG GCATTTTGAT CGTGGAATTT GCCAACCAGC TTCGGGACAA GGGCTACGAG
GTGAAAGAAG CCATTCTGGA AGGCGCCAGC CTGCGCTTCC GTCCGGTACT GATGACCACC
ATATCTACGG TGTTCGGGGC GGTTCCGCTG GTGATTGCCA CTGGTGCCGG GGCCGAGAGC
CGGGCGGCCA TCGGCATGGT GATCCTGGGT GGCCTGATTT TCGCCACCAC CCTGACTCTG
TTCATTATCC CGGTGTTGTA CAACCTTCTG GCCCGCTTTG CGAAATCCTC GAACGCGGTG
GAGCAGGAGC TGGAACGCCT GGCAGCGGGC CCATCCGGCG GTAGCAGTTC GGCGGCGGTG
CCACAGCGCA AGGCGGACGA TTTCTGA
|
|---|
| Protein sequence | MVLSDVSIKR PVFATVLSLL IVVFGVAALL GLPVREYPDI DPPVVSVSTD YTGAAAEVVD
TQITQVIEGA ISGIEGIRSI ESSTEQGESR TSIEFDTSRD VDIAANDVRD AVSRVLNQLP
DEADPPVVQK ADSDARPMMW ITLISDVWDS AELSDFADRV LADRLSVLDG VADVRIGGER
RYAIRVWLDR TRLAARNITV AEVEQALRQN NVELPAGSVD SSTRNFTVRA EGRLSNVEDF
RNLVIRRDGN DLLRLGEVAN VQVGVESDVG RLRANGETAI GMGVIRQSKA NTVAVSDAVK
AELVKIRETL PPEVRIAESY DESVFIRASI KEVLTTLAIA VSLVILVIFL FLRSWRATLI
PAVTIPVAVI GAFIGLGFLG FSINVLTLLA IILAIGLVVD DAIVMLENIQ RRIDEGEPPL
LAAYRGAKQV AFAVIATTLT LVAVFVPISF MGGNVGRLFA EFGFTLAAAV VVSSLVALTL
APMLCSKWLR HSPDSAEGHR LWAFSERILN GLTNGYQRML RFSLNQPGLL LGLGIVGLIV
AVVIFPRLPQ ELAPTEDRGV IIMPVSAPRG STVEFTDHFV KQAEERLLPY LDDGIAERFL
SIVGFRDEED NAFMIMGLVP WEQRDIKQQQ VTTEIRDKLS DISGVRISVI NPPGLGQRGF
NQPVEFVIAG PDYESVQAWS EEIVERAKEN PNLLNVDTDF ELTRPELKVN IDRDRAADLD
ITIEDVGLTL QTMLASRQVT TYLDRGREYD VIIQADDADR ATPGDMEQIF LRPRAGGELI
PLKALVSVEE IGANPDLRRI DRLPAVVVSA SLAEGYDLGS ALTYLNNLAV DNLPPEARLS
YKGLSQEFQD SSAAIYLTFG LAFIIVFLVL AAQFESWIHP LIIMLSVPLA VTGALIALAW
SGISLNIYSQ IGIIMLLGLM AKNGILIVEF ANQLRDKGYE VKEAILEGAS LRFRPVLMTT
ISTVFGAVPL VIATGAGAES RAAIGMVILG GLIFATTLTL FIIPVLYNLL ARFAKSSNAV
EQELERLAAG PSGGSSSAAV PQRKADDF
|
|---|
| |