| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3841 |
|---|
| Symbol | |
|---|
| ID | 4655316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 4262402 |
|---|
| End bp | 4263871 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639813818 |
|---|
| Product | betaine aldehyde dehydrogenase |
|---|
| Protein accession | YP_961097 |
|---|
| Protein GI | 120556746 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCAT CTCTTCCTGT GGTTCAGAAT TTTGTCCACG GCCGGTTTCT GGCCAACAGC
ACCGGCGAGA CCTTCCCGGT GGTGAATCCG GCCACGGGCC AGGTGATCTA TGAAGTGGAA
GTGGCGGATG AGTCTGTGCA ACAGGCCGCC ATCGAGAGCG CCCGCGCCGG TTTTGCCCAG
TGGGCCGCCA CACCGGCCAT TGAGCGCAGC CGTATTCTGC TGAAAGCGGT GGCCTTGCTC
CGCGAGCGCA ACGACGAGCT GGCGGCAGTG GAAGTGCGTG ACACCGGTAA ACCTTGGCAG
GAAGCGGAAG CTGTGGATGT GGTGACCGGC GCCGATGCCA TTGAGTTCTT TGCCGGCCTG
GCGCCGTCCA TCGAAGGTAA CCAGCAGGAT CTGGGTGGCG ATTTCTACTA CACCCGCCGG
GAGCCGCTGG GCATCTGCGC CGGTATCGGC GCCTGGAACT ATCCGATCCA GATCGCCTGC
TGGAAGTCGG CCCCGGCCCT GGCCTGCGGC AACGCCATGA TCTTCAAGCC ATCCGAAGAA
ACCCCCATGG GCGCAGTGAA GCTGGCGGAA ATCTTTATCG AAGCCGGTGT GCCGGCGGGC
GTGTTCAACG TGGTGCAGGG CGCTGCCGAA GTGGGCCAGT GGCTGACCCA TCACCCGGAG
ATTGCCAAGG TGTCGTTCAC CGGCGAGGTG GGCACCGGCA AGAAGGTGAT GGCCGCCGCC
GCGTCGTCGC TGAAAGACGT GACCATGGAA CTGGGTGGCA AGTCGCCGCT GATCATTTTC
GACGACGCGG ACCTGGAGAA CGCCATCTCC GCCGCCATGG TGGGTAATTT CTACACCCAA
GGCGAGATCT GCACCAACGG TACCCGGGTG TTTGTGCACG AGGACCTCTA CCCGCGCTTT
ATCGAGCGCC TGCTGGAGCG CACACGCAAG AACATCAAGG CCGGTGACCC GATGAACCCG
GACACCAACT TCGGCGCGCT GATCTCCAAA AAGCATCAGG AACTGGTGTT GGGTTACATC
AGCAAAGGGC TGGCCGAAGG CGCCACGCTC AGCCACGGCG GACGGGCCTT TGAGCCGGAG
GATTCTCAGG GCGGCTATTT CGTGGAACCG ACCATTTTCA CCGACTGCAC CGACGACATG
ACCATCGTGA AGGAAGAGAT CTTCGGGCCG GTGATGTCTG TGCTCACCTT CCGCGACGAA
GACGAGGTGA TTGCCCGTGC CAACAATACC GATACCGGAC TTGCCGCGGG TGTGTTCACC
AATGATATCC GCCGGGCACA CCGGGTGATT CACCAGATCC AGGCCGGCAT CTGCTGGATC
AACAGCTACG GTGCCTCCCC GGCGGAAATG CCGGTGGGTG GCTACAAACT CTCCGGTATC
GGTCGTGAGA ACGGGCGCGA GACCATTGCG CACTACACCC GGATCAAGTC GGTGTATGTG
GGCATGGAAG ACATCGACGC CCCGTTTTAA
|
|---|
| Protein sequence | MSASLPVVQN FVHGRFLANS TGETFPVVNP ATGQVIYEVE VADESVQQAA IESARAGFAQ
WAATPAIERS RILLKAVALL RERNDELAAV EVRDTGKPWQ EAEAVDVVTG ADAIEFFAGL
APSIEGNQQD LGGDFYYTRR EPLGICAGIG AWNYPIQIAC WKSAPALACG NAMIFKPSEE
TPMGAVKLAE IFIEAGVPAG VFNVVQGAAE VGQWLTHHPE IAKVSFTGEV GTGKKVMAAA
ASSLKDVTME LGGKSPLIIF DDADLENAIS AAMVGNFYTQ GEICTNGTRV FVHEDLYPRF
IERLLERTRK NIKAGDPMNP DTNFGALISK KHQELVLGYI SKGLAEGATL SHGGRAFEPE
DSQGGYFVEP TIFTDCTDDM TIVKEEIFGP VMSVLTFRDE DEVIARANNT DTGLAAGVFT
NDIRRAHRVI HQIQAGICWI NSYGASPAEM PVGGYKLSGI GRENGRETIA HYTRIKSVYV
GMEDIDAPF
|
|---|
| |