Gene Maqu_3820 details

Gene Information

• Locus tag: Maqu_3820
• ID: 4654571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 4240493
• End bp: 4241131
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 639813797
• Product: TetR family transcriptional regulator
• Protein accession: YP_961076
• Protein GI: 120556725

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACGAC TTGCCGGCGG AAAACTGAAA CTGGTTCAGG CCGCACTGAG GCTGATTACC 
CAAAGCCGCA GCCTGACCTC ACTGGGCCTA CGGGAACTGG CCCGGGAGGC GGGGTTGAAC 
CCGAATACCT TTTACCGGCA CTTCCGCAAT CTGGACGAAT TCGGTTTGCA GGTACTGGGG 
TATATCGCCG AGGACATGAA AGCCGGTGTA CGGCAGCTGC GGCAGATGGC GGATTCCTCG 
GAACAGGCCT CCCACGACAC CGTCACCTTT GTGTACCACT ACTTCCTGGC CAACCCGGCG 
GCAACCACGG TGGCGGTCAG GGAACTGCAC GGCCCGTCGC CCGTGTTACG CCGGGCGCTG 
GAGGCACAAC TGGACGCCAG CGCACGGGAG ATGGCCGAGG ATATTCTGGA GCGCGGGCTG 
GTGCCCGGTG TCGACGAGGT GGTGGTACAA GAGATTTCCA ACATGACCAT CCGCTACATT 
CTGTTCCGGG CCATGGACTA TATCGAGAAG CCGGAGCAGC GGGAGCGGAT TCAGCTGGAA 
ACGGAGCGGT TCATCAACCG GCAGTTCCGG GGGGCATTAA TCGAGGAACT GGATTCCGGG 
CAGATTCTGG CGCTGAAACA GGCGCCGGCC GCTGACTGA 

 

Protein sequence

MQRLAGGKLK LVQAALRLIT QSRSLTSLGL RELAREAGLN PNTFYRHFRN LDEFGLQVLG 
YIAEDMKAGV RQLRQMADSS EQASHDTVTF VYHYFLANPA ATTVAVRELH GPSPVLRRAL 
EAQLDASARE MAEDILERGL VPGVDEVVVQ EISNMTIRYI LFRAMDYIEK PEQRERIQLE 
TERFINRQFR GALIEELDSG QILALKQAPA AD