| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3815 |
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| Symbol | |
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| ID | 4654566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 4233572 |
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| End bp | 4234570 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639813792 |
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| Product | 23S rRNA pseudouridine synthase F |
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| Protein accession | YP_961071 |
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| Protein GI | 120556720 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACC GAACTTCAAC CCGACTGAAC AAATACATCA GCGAGAGCGG TATGTGCTCC
CGTCGGGATG CCGACCGGTT CATCGAGCAG GGCAACGTGC ACATCAACGG TCGCCGGGCC
CAGGTGGGCG ATCAGGTGTT GCCCGGAGAT GTGGTGAAGG TCAATGGCCA GGTGGTGGAG
CCGAGAGACG AAGAAGATCT GGTGTTCATT GCCCTGAATA AACCGGTGGG TATTGTCAGC
ACCACCGACA GCGCGGAGAA AGACAACATC CAGCGTTTTG TCGGCCACAG TGAACGGATT
TTTCCCATTG GCCGGCTCGA CAAGGATTCC CAGGGGCTGA TTTTCCTGAC CAGCAATGGC
GATCTGGTGA ACAAGATCCT GCGCGCCGGC AATAATCACG AGAAGGAATA CTTGGTCACG
GTCGACAAGC CGGTCACCCG GGAATTCGTA GAGGGAATGA GCAACGGTGT GCCGATTCTG
GGGACCATGA CCAAGCGCTG CAAGGTCGAA AAGGTGTCCC GGTTTGTGTT CCGCATTACC
CTGGTTCAGG GCCTGAATCG CCAGATTCGC CGTATGGCGG AGTACTTTGG CTACGAGGTG
GCCAGGCTGG AGCGGGTGCG CATCATGAAC GTCAGTCTGC AGGGGTTGCC GGTGGGTGCC
TGGCGGGATC TGACGGAGAA GGAACTGGCG GTACTGTTCG ATGCCATCCG GGATTCCTCG
TCCGAGGCCA CGGAGCCTGC TGGCAGCAAG CCCCGGAAGA AGCCGGCGGG TGCGAGGGGC
GCTCGCCCGG GGCCCGGAGG CAAACCGGCG CGGGCTGGCG CAAAAGCTGG CGGGAAGTCA
CCGGCTGGTA AAGGGCGAAA AGGCCCCGGT TCCGGGCCCG GTAAACGGCC CTCTGGTAAA
CCCGGTGGCG GCCCAAAGCC GGGTGGTCGT GGTCCGGGGT CCAAGGGTAA GCCATCGAAA
CCGGGCAAGC CCCGCAAGCC GTCCATCAAG AAACGTTGA
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| Protein sequence | MANRTSTRLN KYISESGMCS RRDADRFIEQ GNVHINGRRA QVGDQVLPGD VVKVNGQVVE
PRDEEDLVFI ALNKPVGIVS TTDSAEKDNI QRFVGHSERI FPIGRLDKDS QGLIFLTSNG
DLVNKILRAG NNHEKEYLVT VDKPVTREFV EGMSNGVPIL GTMTKRCKVE KVSRFVFRIT
LVQGLNRQIR RMAEYFGYEV ARLERVRIMN VSLQGLPVGA WRDLTEKELA VLFDAIRDSS
SEATEPAGSK PRKKPAGARG ARPGPGGKPA RAGAKAGGKS PAGKGRKGPG SGPGKRPSGK
PGGGPKPGGR GPGSKGKPSK PGKPRKPSIK KR
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