Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_3678 |
Symbol | |
ID | 4653891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 4074860 |
End bp | 4076311 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639813655 |
Product | rhomboid family protein |
Protein accession | YP_960934 |
Protein GI | 120556583 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0309467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGATTA TTCCTGCCGA GAATGCCGTA AACTGGAAAC GCCCACCCTG GGTAACCCTG GGCCTGATCA TGGCCTGCCT GCTCGTCTTT CTGTTCTACC AGGGCGGAGA CGACCGCAAG TTCGAAGCCG CACTGGAAGA CTATCTGGAG AGCGATCTGC TGGCCCTGGA GGCCCCCGCC TACGAGGATT ACCTGCAGCG GGAAATCCAG TTCGAAGGCA GCCAGCAGCG GGTTCTGGAG TTGCAGGAAT TCCAGCAGCT TCAGGAAAAT GAGGAGGCAC TCTGGCAGGC GGTGACGCTG CTGCTGGATC GTGAGTTTTA CCAGTATCTG CAGCAGAACC GGGATCTGAT CTGGGCCCCT GCCCAGCGCA ACCTTTGGCT GGAGCGGCGC TCGGCAATTG AGGAACAGTG GATCAGCCGG ATGAGTGCCT ATCAGTTGGG ACTGGTGCCG GCAGAGCTCT CGCTGTACAC GCTCATTACC TACCAGTTCC TGCACGGCGG CTGGGGCCAC ATTATTGGTA ACCTGCTGTT CCTGTTCCTG CTGGGTTTTA CCGTGGAAAA AGCGCTGGGC CCGGGGCGCT TTCTGGTGGC TTATCTTGTC TGCGGTGCCT TGTCCGGCCT GGTATTTACC GCCTTTTCCA TGGGTAGTCA GGTACCTCTG GTGGGCGCGT CCGGCTCCAT TTCCGGGTTG ATGGGTATGT ATGTGGCTAT TTACGGGCTG CAGCGCATCC GCTTCTTCTA CTTCCTGGGC GTTTACTTCA ACTATTTCCG GGCACCGGCC ATCGCCATGC TGCCGGTCTG GCTGGGCAAG GAAATCTATG ACTACTGGTT TGCCGGTGCC ACCGGTATTG CCTATATGGC CCATGCCGGT GGCCTGGCGG CCGGTGCAGG GTTGGTGTGG CTGCTGGGTC AGAGCTGGCT GCAGGTGAAA GACGAGTTCT TCGAACCGGA GCAGGAAGAA CAGGACGAAC AGTTCACCAA GGCCTATGGC CAGGCCATGG CCAGCCTTGG CCGCATGGAG TTCGATCTGG CCCGGCGCCA GTTCGAGGCG TTGCGGGAGC GTTATCCGGA ACGGCCCGTG CTGCTCGAGC ACCTGTATCA ACTGGCTAAA TTAAGGCCGG ACCTGGACAG CTACCGGATG CGTGCCGAAG AAATGATGGC CGATGCCATC GCCCGGCGGC AGCCGGAACA GATGGTGGAT GTCTGGCAGG AGTATCTGAG CAAGGGCGAG GCCTATCATC CGTTGGCACC GGAGGCGCAC AATCGTGTGC TGTTCGCCAG CCTGAAACGC CATGATTTCA AAGCCGCAGA GAAGGCGTTT GAACGCATGC GAGCCAAGGC CGAACCGGAC ATGGTGAATG AAGCCTGCCG GCTACTGGTG GCGGAGTTCG AGAAACTGCA GATGGAGCCG AAAGCGCGCC ATTACCGGCA GCTGTTGCAG GTTCACGGCT GA
|
Protein sequence | MLIIPAENAV NWKRPPWVTL GLIMACLLVF LFYQGGDDRK FEAALEDYLE SDLLALEAPA YEDYLQREIQ FEGSQQRVLE LQEFQQLQEN EEALWQAVTL LLDREFYQYL QQNRDLIWAP AQRNLWLERR SAIEEQWISR MSAYQLGLVP AELSLYTLIT YQFLHGGWGH IIGNLLFLFL LGFTVEKALG PGRFLVAYLV CGALSGLVFT AFSMGSQVPL VGASGSISGL MGMYVAIYGL QRIRFFYFLG VYFNYFRAPA IAMLPVWLGK EIYDYWFAGA TGIAYMAHAG GLAAGAGLVW LLGQSWLQVK DEFFEPEQEE QDEQFTKAYG QAMASLGRME FDLARRQFEA LRERYPERPV LLEHLYQLAK LRPDLDSYRM RAEEMMADAI ARRQPEQMVD VWQEYLSKGE AYHPLAPEAH NRVLFASLKR HDFKAAEKAF ERMRAKAEPD MVNEACRLLV AEFEKLQMEP KARHYRQLLQ VHG
|
| |