| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3619 |
|---|
| Symbol | |
|---|
| ID | 4657228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 4003176 |
|---|
| End bp | 4004279 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639813596 |
|---|
| Product | tRNA 2-selenouridine synthase |
|---|
| Protein accession | YP_960875 |
|---|
| Protein GI | 120556524 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2603] Predicted ATPase |
|---|
| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.611384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCA GACCCGATAC CGACGACTAC CTCAACCTGT TCCTGAACGA TGTGCCGCTG
ATGGACGTCC GGGCGCCGGT GGAATTTGCC AAAGGTAGCT TCCCGTCTGC AGAAAACGCC
CCGCTGATGA ACGACGAAGA ACGGCACCGG GTGGGCATCT GTTATAAGGA AAAGGGCCAG
GACAAGGCCA TTGAACTGGG GCACCAGTTG GTCTCCGGCG ACATCAAGGC CCAGCGAATT
GAAGCCTGGA AGCGCTTTGT GGCACAACAC CCGGAGGGGT ATCTGTTCTG TTTCCGGGGC
GGATTGCGCT CGCGCCTGAC CCAGCAGTGG ATCAGGGACT CCGGCATCGA CTACCCGCTG
GTGAAAGGCG GCTACAAGGC CCTGCGTCGC TTCCTCATTG ACAGCCTGGA AGCACAGATC
GAATCAGGTC AGTTCCGGAT TCTCAGCGGC CGCACCGGTA CTGGCAAGAC CCGGGTACTG
ATGCAACTGC CCAATCCGGT CGATCTGGAG GGCCTGGCGA ATCACCGGGG CTCCAGCTTT
GGCCGGCAGG TAACTCCCCA ACCCTCCCAG ATCGACTTCG AGAACCGGCT GGGGGTGGCC
ATGCTCAAGG CCAGGCACCA AGCGGGAGGG CCAATCTACC TTGAAGACGA AAGCCGCCTG
ATTGGCCGCT GCGCCCTGCC GGAAACCCTT CGGGCCCGGA TGTCTGAATC ACCCCTGCTG
ATTCTGGAAC AGGCCATGGA AGAGCGTATT GCCATCATCC GGGCCGACTA CGTTGAAGGC
ATGCTGGCCA GTTACCGGGC CAGGGACGGT GAAGACGCCG GCTGGCTGAA TTTCCGGGAC
TACCTGTTGA GCGCCATCGA CCGCATTCGC AAACGCCTGG GCGGCGAGCG TTACCAGAAA
CTCCGTAACC TGATGCTGCA GGCTCTGGAT CAACAGGAAG CCAATGGCTC CCTGGAAGGG
CATCATGGCT GGATTGAGGC CCTGCTGACC GACTACTACG ACCCCATGTA CGACTACCAG
CTTACCCAGA AACAGGGCGA AATACTGGTA CGGGGCGGCC CCGAAGTCAT CACCGAGTGG
GCCAGATCCC GCACCAGCAC GTAA
|
|---|
| Protein sequence | MASRPDTDDY LNLFLNDVPL MDVRAPVEFA KGSFPSAENA PLMNDEERHR VGICYKEKGQ
DKAIELGHQL VSGDIKAQRI EAWKRFVAQH PEGYLFCFRG GLRSRLTQQW IRDSGIDYPL
VKGGYKALRR FLIDSLEAQI ESGQFRILSG RTGTGKTRVL MQLPNPVDLE GLANHRGSSF
GRQVTPQPSQ IDFENRLGVA MLKARHQAGG PIYLEDESRL IGRCALPETL RARMSESPLL
ILEQAMEERI AIIRADYVEG MLASYRARDG EDAGWLNFRD YLLSAIDRIR KRLGGERYQK
LRNLMLQALD QQEANGSLEG HHGWIEALLT DYYDPMYDYQ LTQKQGEILV RGGPEVITEW
ARSRTST
|
|---|
| |