| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3509 |
|---|
| Symbol | |
|---|
| ID | 4657263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 3880586 |
|---|
| End bp | 3881929 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639813487 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_960766 |
|---|
| Protein GI | 120556415 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGA CTGTCCGCCA CGGACTGACA ATTCTGCTGA CACTGGCCAT GGTGGTGCTG
TCAGTGACTG CTCAGGCCGA ACGAAAACTG CTGGACCGTG TGGTTGCGAT CGTGGATGAC
GAGGTGATCC TCCAGAGTGA GCTGGACGCC CGTATCAATA CCATTGTCGG TCGCCTGAGC
GCGCAGGGCA CTGGTCTGCC GCCCCGGGAA CTGCTTGAGC AGCGGGTACT GGACCAACTG
ATTCAGGAAT CCCTGCAGCT GCAGATGGCC GACCAGATGG GCATGCGCAT CAGCGACAAC
GAGCTGAACG AGACCCTGGC CAATATTGCC CGCAGCAACG GCATGACCCT GGCCGAATTC
GAAGGCCAGC TGGCGGAAGA AGGGGTGACC TATCAGCAGG CCCGGGAACA GATCCGCAAT
GAAATGCTGA CCAGCCGGGT GCAGCAGCGT CGCGTAGGTA ACCGGGTACG CGTTACCGAC
CGGGAAGTGG AAAACTATCT CCAGGCCCAG CAAGCCAACG GCAGTACCGA TGCCGAATAC
CGTCTGGCCT ATATCTTTAT CGAAGTTGAC GACCCGGCCA GCGAAGCGTC GGTGGATGAG
GCCCGGGAGA CAGCACAGGC CTTGCGCCAG CAGATTGCCA ACGGTCGGGA CTTCCGGGAA
GTAGCGGTTG CCGAATCCGA TGCCAGCAAC GCCCTGGAAG GGGGCGACAT GGGCTGGCGA
TCTGAAAGCC AGTTGCCCTC ACTGGTCGCA CCGGTGGTAC CGGATCTGGA AGTTGGTGAG
CCTTCGCAGG TGCTGGAAAA CAACAGTGGT TTTCATCTGG TGATGGTGAT GGACAAGCGC
GGCGGTGAGC AGCAGCAATT CATCCAGCAG CACCGGGTCC GGCATATCTT GGTACGGCCT
TCCGAAGCGG TGACCGATGT GCAGGCGGAG CAGCGCATTC GCGAGATCTA CCAGCAGTTG
CAGGATGGCG CCGACTTTGC CGATCTGGCC CGTGAACGCT CGGACGATCC GGTCTCCGGC
TCGGACGGCG GTAATCTGGG CTGGGTAAGC CCGGGCCAGA TGGTGCCCGC TTTTGAAGAA
GCCATGAATC AGGCGCAGGT GGGCGAATAT TTCGGGCCTT TCCGGTCCCA GTTTGGCTGG
CACATCCTGC AGGTGGAGGA GCGCCGGCGC CAGGACGTGA CCGAACAGAA TCGCGAGTCC
CAGGCTCGTC AGGCCATCTA TATGCGGAAA TTCGAGCTGG AATTGCAGAA CTGGCTGCGT
GAGATTCGGG ACGAAGCCTT TGTTGAGTTC AAGGGTGAAT ATGCCGATAT GAACCCGGAG
AGCGAGGAAG CAAACCCGTC ATGA
|
|---|
| Protein sequence | MKATVRHGLT ILLTLAMVVL SVTAQAERKL LDRVVAIVDD EVILQSELDA RINTIVGRLS
AQGTGLPPRE LLEQRVLDQL IQESLQLQMA DQMGMRISDN ELNETLANIA RSNGMTLAEF
EGQLAEEGVT YQQAREQIRN EMLTSRVQQR RVGNRVRVTD REVENYLQAQ QANGSTDAEY
RLAYIFIEVD DPASEASVDE ARETAQALRQ QIANGRDFRE VAVAESDASN ALEGGDMGWR
SESQLPSLVA PVVPDLEVGE PSQVLENNSG FHLVMVMDKR GGEQQQFIQQ HRVRHILVRP
SEAVTDVQAE QRIREIYQQL QDGADFADLA RERSDDPVSG SDGGNLGWVS PGQMVPAFEE
AMNQAQVGEY FGPFRSQFGW HILQVEERRR QDVTEQNRES QARQAIYMRK FELELQNWLR
EIRDEAFVEF KGEYADMNPE SEEANPS
|
|---|
| |