Gene Maqu_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_3478 
Symbol 
ID4655242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp3846346 
End bp3846891 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content56% 
IMG OID639813457 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_960736 
Protein GI120556385 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTGGA TTATCCGACT GGACGAGAGC CTGGCCTGGC TCTCCAAACT TTGCGGCTGG 
ATCGCCTGTG TGGCTATGAT CCTGATGGCT GCCAACGTCT TCTATGACGT CGTCGCACGC
TATGCTTTCA ACGATGTGTC CATCGCCATG CAGGAAATGG AATGGCACCT TTATTCAGTC
GTCTTCCTGT TGGGTATTCC CTATGCCCTC CGCACCGATG GTCATGTCCG TGTGGACGTG
TTCTACACCA ACTGGAGCCA GAAGCGCAAA GCCTGGATTA ACCTGATAGG CGCCGTTCTT
TTTGTTATTC CGTTCGCCTA CCTGATTGCC ACCTATGGCT ACAGCTACGC GATGGATGCG
TACCAGATGG GCGAAGGCAG CGGCGACCCC GGTGGCCTAC CCCATCGCTG GGTGATCAAA
TCCGTGATTC CGGTCAGTGC TTTCTTTATG GGAACGGCCG GTTTGAACAT GGTGACCTAC
GCCATCCGTG TGATGGCCGG TGACAAACGG TACGAAGGCG AGCACAGCGC AGGAGGTCTG
GCATGA
 
Protein sequence
MRWIIRLDES LAWLSKLCGW IACVAMILMA ANVFYDVVAR YAFNDVSIAM QEMEWHLYSV 
VFLLGIPYAL RTDGHVRVDV FYTNWSQKRK AWINLIGAVL FVIPFAYLIA TYGYSYAMDA
YQMGEGSGDP GGLPHRWVIK SVIPVSAFFM GTAGLNMVTY AIRVMAGDKR YEGEHSAGGL
A