| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3390 |
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| Symbol | |
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| ID | 4654741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 3749930 |
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| End bp | 3752533 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639813369 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_960648 |
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| Protein GI | 120556297 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.81451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACG GCGTTCATAT CGTCTGCCCA CACTGCCAAT CCATCAATCG CGTGCCAGCC
AACAAGTTGG CAGAGAAGCC CAGTTGCGGG CGGTGCCAGC ACCCGCTGTT CACCGGAGAA
ACCATCGAGC TGACCACAGC GACGGTAGAG GACATCACCG ATCTCAAGAG GGTCGAGCAG
GCGCTGAACT CTATGCGCCT ACAGCGAGAA GAGTTGGCCA GCCACGTTCC CGGTATGCTT
TACCAATACC GTCTTCGTCC GGACGGCAGC TCGCACTTCC CTTATGCCAG CGCGAAGATA
CGGGAAATAT ACGGGGTTGC ACCGGAGGAT GTTGTTGAAG ATGCCACTCC TGCGTTCGCT
GCGCTCCATC CTGAAGACCG CGACCGTGTG CATGAAACCA TACAGGCGTC GGGGCAGTCA
CTCGCGCTTT GGCATGACGA GTACCGGGTG CAGTTTCCAG ACGGTCGGGT GATCTGGGTC
GAAGGCGAGG CGTCGCCTGA AGCCATGCCT GATGGGAGCA TCCTCTGGCA CGGCTATATC
CATGATGTCA CCTCACGCAG AAGATCCGCG GAAGAGCTTC GCCTTGCGGC TACAGTTTTT
GAGCACGCAG GAGAGGGCAT CCTCGTTACG GACACTCAAG GCCACATTGT CAACGTCAAT
CGGGCGTTTA CCGTGATCAC TGGTTATGCG CGGGAGGAAG TAGTGGGTCA GACACCTCGT
CTGCTCGAGT CCGATCGCTA TGACGATGAG TTCTATCAGA CCGTTGGGCA GGCTCTACGT
GAGCACGACT ATTGGCACGG AGAGCTCTGG TGCCGACGCA AGAACGGCAG TCAGTTTGCC
GCGCTGCTGA CGATCAGTGC GGTCCCGGAT ATGCGGGGCA ATATCGAGCA TTACGCCGCC
ATGTTTTCCG ACATCACAGC GCTGAAGGAG AACCAGCAAC AGCTTGAACG CGTTGCTCAT
TACGACCTGC TCACCGGCTT GCCCAATCGA CTATTGCTTG GAGACCGCCT TAAGCAGGCC
ATTCGTCAGA CACGTCGGCG TGGCATGCAC CTGGCGGTTG TCTTCATCGA TCTGGATGGA
TTCAAGAAGG TCAACGACCA GCACGGCCAC GCAGTCGGCG ACAAATTGCT TTCCGTCCTG
TCCAGGCGTA TGACGCAGGT GTTGCGCGAA GACGATACCT TGGCCCGCCT TGGTGGTGAT
GAGTTTGTCG CTATTCTGGT CGACCTGCCG GATAGTTCCG TCAGCGTACC GATTCTCGAG
CGCCTGATCG AGGTGGCTTC ACAGCCCGTA CCGATTGGTG ACGCACTGTG CGAGGTGAGC
GCGAGTATCG GTGTGAGCTA TTACCCGCAA GGCGAAGATA TCGACGCCGA CCAACTGCTG
CGGCAGGCAG ATCAGGCTAT GTATCGTGCC AAGCAAGCCG GCAAGAATCG ATATCACGTT
TTCGATACGG AGAAGGATTG TACGCTGCGC ACCCGTCACG AAGGATTTGA CAGCATAGAG
AATGCACTTG CCAATGGGCA GTTTCTGCTT TATTACCAAC CTAAGGTCAA CATGCGCACC
GGTGAGGTGC TGGGCGCCGA AGCCTTGATC CGCTGGCAAC ATCCGACGCG TGGCTTGTTA
TCTCCTGCCT CCTTCATACC CATCATTGAG AACCATCCGC TCGGGATTGA CGTGGGGGAA
TGGACCATCG AGGCTGCGCT GACCCAGATC GAAGTTTGGC GCAAGGCCGG CCTACATGTC
CCGATCAGCG TGAATATCGG TGCGCGACAC TTGCTGCAAC CGGACTTCAT CATGCATCTA
CGGGGTATGT TGTCACGACA TCCCGGCGCC CGGCCGCAAG ACCTTGAACT GGAAATCCTC
GAAACCAGCG CCGTGGAGGA CTTCGTTCAG GTGTCTCAGT TGATGGCCCA GTGCGGGAGG
ATGGGATTGC GTTTTGCCCT CGACGATTTC GGCAGCGGCT ATTCATCGCT GACCTATCTG
AAGCGCCTGC CCGCGTACCT GCTCAAGATC GACCAGGGGT TTATACGCGA CATGCTCGAG
GATCCGGACG ATATCGCCAT CCTGGATGCG CTACTGGCAC TGGCAAGGTC GTTTGGCAGA
AACTGCATCG CGGAGGGAGT CGAATCCATT CAGCATGGTG AAATGCTGCT GCGTCTGGGA
TGCGAGTGGG GCCAGGGTTA TGCCATCGGG CATCCGATGC CGGCGCATGA ATTCGAGCAA
TGGCTACACA CCTGGCAGGT ACCCTTATCC TGGAAGGGAT TCAAACCTGA CAGTCGCTCC
GCGCTGCCCG TGCCGTTCAC ATACGCCGAC CACCGGGTCT GGATTTCCCA GATGATCGAC
TATCTGTCAG GTAAGACCCA AGTGCCGCCT CAACCCGAAG CACTCCAATA CTGGCGGGAT
CAAAGTGGCC GCCCTACGTT CTTCGGCAAG GACCCTGATG ATCAGGTCGA TGTCCTGCAT
CAGAGCATCC AGCAGTTAGC GAACACCCTG AGTGAAATGA AAAATGCCGG CCGTGTCGAG
GCATTGAGGG CTGGCATCGA CAAGTTGCAA CATTTGCAGG CGGATCTGCT GGGATTGCTG
CCGCCAGACC AGAAGCCGGC TTGA
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| Protein sequence | MSDGVHIVCP HCQSINRVPA NKLAEKPSCG RCQHPLFTGE TIELTTATVE DITDLKRVEQ
ALNSMRLQRE ELASHVPGML YQYRLRPDGS SHFPYASAKI REIYGVAPED VVEDATPAFA
ALHPEDRDRV HETIQASGQS LALWHDEYRV QFPDGRVIWV EGEASPEAMP DGSILWHGYI
HDVTSRRRSA EELRLAATVF EHAGEGILVT DTQGHIVNVN RAFTVITGYA REEVVGQTPR
LLESDRYDDE FYQTVGQALR EHDYWHGELW CRRKNGSQFA ALLTISAVPD MRGNIEHYAA
MFSDITALKE NQQQLERVAH YDLLTGLPNR LLLGDRLKQA IRQTRRRGMH LAVVFIDLDG
FKKVNDQHGH AVGDKLLSVL SRRMTQVLRE DDTLARLGGD EFVAILVDLP DSSVSVPILE
RLIEVASQPV PIGDALCEVS ASIGVSYYPQ GEDIDADQLL RQADQAMYRA KQAGKNRYHV
FDTEKDCTLR TRHEGFDSIE NALANGQFLL YYQPKVNMRT GEVLGAEALI RWQHPTRGLL
SPASFIPIIE NHPLGIDVGE WTIEAALTQI EVWRKAGLHV PISVNIGARH LLQPDFIMHL
RGMLSRHPGA RPQDLELEIL ETSAVEDFVQ VSQLMAQCGR MGLRFALDDF GSGYSSLTYL
KRLPAYLLKI DQGFIRDMLE DPDDIAILDA LLALARSFGR NCIAEGVESI QHGEMLLRLG
CEWGQGYAIG HPMPAHEFEQ WLHTWQVPLS WKGFKPDSRS ALPVPFTYAD HRVWISQMID
YLSGKTQVPP QPEALQYWRD QSGRPTFFGK DPDDQVDVLH QSIQQLANTL SEMKNAGRVE
ALRAGIDKLQ HLQADLLGLL PPDQKPA
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