| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3310 |
|---|
| Symbol | |
|---|
| ID | 4653613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 3651243 |
|---|
| End bp | 3651965 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639813288 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_960568 |
|---|
| Protein GI | 120556217 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.515692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATT TCATTGCCGA ATGGCTGAAC CAGAACGATA TTTTTACTGC CATGACCCTC
ATGGAGTACT GGGATGGCCT GGTCACTACG GTGCACCTGG TGTTCCTGTC GCTGGTGATT
GGCCTGGTTG TGGCGGTGCC ACTGGCGATT CTGCGCACCG TGAAGAATCC GTTCGTGTCT
GGCCCTATCT GGCTGTACAC CTATCTGTTC CGCGGCACGC CGCTGCTGAT CCAGCTGTAT
ATCATTTACT ATGGTGTGGC CCAGATTCCG GGTATTCAGG ACACTTTCTG GTGGGAGATT
TTCAAGGAGC CGCTGTACCC TGCCCTGCTG GCGTTTACAC TGAATACCGC CGCCTATACC
ACGGAGATTA TTCGGGGGGC GATTATTTCC ACACCCAATG GCGAGATTGA GGCGGCGAAG
GCTTACGGTA TGAACTGGTT CCTGCGGATG CGGCGGATTA TTCTGCCGAG TGCGGCGCGG
CGGGCGGTTC AGGCATACTC GAATGAGGTG ATTTTTATGC TTCATGCGAG TGCGATTGCC
AGTGTGGTGA CGATTGTGGA TCTTACGGGG GCGGCGCGTA ATATTTATTC GCGGTTCTAT
GCTCCTTTTG AGGCGTTTAT TTTTGTGGCG CTTTGCTACA TGGCTTTGAC GTTTATTCTG
GTGTTTGTTT TCCGCAAACT GGAAAATCAT CTTTTGCGGC ATCAGCGGCC TTTGAACTCC
TGA
|
|---|
| Protein sequence | MPDFIAEWLN QNDIFTAMTL MEYWDGLVTT VHLVFLSLVI GLVVAVPLAI LRTVKNPFVS
GPIWLYTYLF RGTPLLIQLY IIYYGVAQIP GIQDTFWWEI FKEPLYPALL AFTLNTAAYT
TEIIRGAIIS TPNGEIEAAK AYGMNWFLRM RRIILPSAAR RAVQAYSNEV IFMLHASAIA
SVVTIVDLTG AARNIYSRFY APFEAFIFVA LCYMALTFIL VFVFRKLENH LLRHQRPLNS
|
|---|
| |