Gene Maqu_3237 details

Gene Information

• Locus tag: Maqu_3237
• ID: 4654043
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 3581618
• End bp: 3582187
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 639813215
• Product: retron-type reverse transcriptase-like
• Protein accession: YP_960495
• Protein GI: 120556144
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3344] Retron-type reverse transcriptase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTGG AACCTATCCT GGAACCTGTC TTTCATGTGG ACTCGTACGG GTATCGGTGC 
GGGAAATCCC CGCATGATGC GCTTGCGATC ACGCGAAAGC GGTGCTGGGA AAGGGACTGG 
GTGCTGGAGT ATGACATCCG TGGCTTGTTT GATCATATTG ATCATGAGCT ATTGCTCAAG 
GCCCTTGACC ACCATTGCTC TGAATCCTGG GTGCTGCTGT ATGTGAGGCG CTGGCTAACG 
GCACCGATGC AGACGAAAGA TGGTAAGCAG GAACGACGGA ACGTTGGCAC ACCACAAGGT 
GGCCCGTTAT CGCCAGTTCT GGCAAACCTG TTTCTGCATT ATGCATTGGA TCGTTGGCTG 
ACCGTTCGTC ATCCGGATAT CCCATTCTGC CGATATGCAG ATGACGGAAT ACTGCGTTGT 
CGAAGTGAGC GTGAGGCTCA GTATCTGCAT TCCCAGCTAG ATATGCGTGA GGTGGACCCA 
ATAGCTATTC ACAGAGATGC CCAACAAACG AGTATACTGG CCTGTGTTTG TCCAGGCTGC 
TCGGATAAAT CACCATCAGC TCCTTGCTAA 

 

Protein sequence

MTLEPILEPV FHVDSYGYRC GKSPHDALAI TRKRCWERDW VLEYDIRGLF DHIDHELLLK 
ALDHHCSESW VLLYVRRWLT APMQTKDGKQ ERRNVGTPQG GPLSPVLANL FLHYALDRWL 
TVRHPDIPFC RYADDGILRC RSEREAQYLH SQLDMREVDP IAIHRDAQQT SILACVCPGC 
SDKSPSAPC