| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3187 |
|---|
| Symbol | |
|---|
| ID | 4654792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 3531509 |
|---|
| End bp | 3533050 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639813168 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_960448 |
|---|
| Protein GI | 120556097 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4584] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCGA AGAGGTTATC CATGCGTAAA ATCAAAGAAG TCCTTCGCCT CAAGTGGGAG
CGAGGGCTGA GTAACCGGCA GGTTGCCGCA GCCTGCGGCA TCAGTCGCCC CACTGTGAGC
GAGTATCTGC GGCGTGCTGC TGAGGCGGAG CTTGGCTGGC CGCTGCCAGA GGATCTGAGT
GAAGCCCAGC TGGAGCAACG GCTGTTCCCG CCACCACCGG ATCTGCCGGC ACAGGCCCGA
GGCATTCCGG ATTGGAAGCG AATCCACGAT GAACTCCGGG GCAAGAACGT CACCCTGTTC
CTGCTCTGGC AGGAGTACCG GGAAGCCAAT CCGGATGGCT ACCAGTACAG CTGGTTCTGC
GAGCACTACC GGGCCTGGCA GGGCAAGCTG GATCTGGTGA TGCGTCAGGA CCACCGAGCC
GGTGAAAAGC TGTTCGTGGA CTATGCTGGG CACACGGTGC CCGTCATTGA CCGCACCACC
GGTGAGATCC ATGAGGCGCA AGTCTTTGTG GCGGTGATGG GTGCGTCCAA TTACACCTAC
GCCGAGGCCA CCTGGAGCCA GACCCTGCCG GACTGGATCG GCTCCCACAT CCGAGCCTTC
GAGTTCTTGG GCGGCGTGCC GGAACTGGTG GTTCCGGATA ACCTCCGTTC CGGCGTCAGC
AAGGCCCATC GCTACGAGCC GGATCTCAAT CCGACCTATC AGGATATGGC TAGCCATTAT
GGCGTGGCCG TTGTCCCCAC ACGGGTTCGC AAGCCCCGTG ACAAGGCCAA GGTGGAAGGT
GGCGTATTGA TCGTTGAGCG CTGGATCCTG GCGGCCCTGC GCCACCGTCA GCACTTCTCC
CTGGGGCAGC TCAACGCCAC CATCCGTGAG CTGTTGGAGA AGCTCAATAG CCGCCCCTTC
CGCAAGTTGC CCGGGTGCCG GCTTGATCAC TTCAAACAGC TGGACCAGCC GGTTCTACAA
CCGCTACCCG CCGAGCCGTA TGTCTACGCC GAGTGGAAAA AAGCCCGGGT ACACATCGAC
TACCACGTGG CCATCGATGG GCATTACTAC TCGGTGCCCT ACACCCTGAT CAAGAAAGAG
GTGGAGGTCC GGATCACCCA CAACACCATC GAATGCTTCC ACCGAGGCAA CCGGATCGCC
AGCCACCGGC GTTCGGATCA GAAGGGTCGG CATAGCACCA TCGCCGCTCA CATGCCGGAG
TCCCATCGCC AAGCCGGCGA GTGGACCCCA GAGCGACTGA CCGCCTGGGC AGCCAAGACT
GGACCGGCAA CTGAAAAGCT TATCCGTACC GCGCTGGGGG CAAGAAAGCA TCCGCAACAG
GCCTATCGGT CCTGTCTGGG CATTCTCCGG CTGGGCCAGA GTTACGGCGA GGCACGATTA
GAGCGTGCCT GCCAACGCGC CCTGATGCTG GGCAGTTGCC GATACAAGAG CATCGAATCC
ATCCTCAAAC ACCGCCTGGA TGAGCAGCCC CTGGAAGAGC AACAAGACCT GGCCTTACCC
GACACACACG ACAACATCCG CGGCCCTGCC TACTACCACT GA
|
|---|
| Protein sequence | MPAKRLSMRK IKEVLRLKWE RGLSNRQVAA ACGISRPTVS EYLRRAAEAE LGWPLPEDLS
EAQLEQRLFP PPPDLPAQAR GIPDWKRIHD ELRGKNVTLF LLWQEYREAN PDGYQYSWFC
EHYRAWQGKL DLVMRQDHRA GEKLFVDYAG HTVPVIDRTT GEIHEAQVFV AVMGASNYTY
AEATWSQTLP DWIGSHIRAF EFLGGVPELV VPDNLRSGVS KAHRYEPDLN PTYQDMASHY
GVAVVPTRVR KPRDKAKVEG GVLIVERWIL AALRHRQHFS LGQLNATIRE LLEKLNSRPF
RKLPGCRLDH FKQLDQPVLQ PLPAEPYVYA EWKKARVHID YHVAIDGHYY SVPYTLIKKE
VEVRITHNTI ECFHRGNRIA SHRRSDQKGR HSTIAAHMPE SHRQAGEWTP ERLTAWAAKT
GPATEKLIRT ALGARKHPQQ AYRSCLGILR LGQSYGEARL ERACQRALML GSCRYKSIES
ILKHRLDEQP LEEQQDLALP DTHDNIRGPA YYH
|
|---|
| |