| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3107 |
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| Symbol | |
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| ID | 4654468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 3450589 |
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| End bp | 3452208 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639813087 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_960368 |
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| Protein GI | 120556017 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGAGC GCCTGCAACA CCGACTGGGC TTGCAGACAA TACCCGGAGT GTTCTTTAGC
TCAGCTGCTA TTGCCGCGCT GTTTGTGGCT TTGGCGATTC CTTTTGACCA GGCTGTGGCC
AGCAGTTTCG GGCAGTTGAC CGGATGGGTG GCCCGTAACC TGGGCTGGTT CTATATCCTG
GCGGTGTCTT CGCTTCTGAT TTTTCTTCTT GGTCTGGCGC TCAGTCGCTA CGGCAGCATT
CGCCTTGGGG CGGATGACAG TCGGCCGGAC TACTCGAATC TCACCTGGTT CACCATGCTG
TTTGCTGCTG GCATTGGCAC TATCCTCATG TTCTGGGGGG TGGCTGAGCC GGTGTCCCAC
TTTGCCAATC CGCCATTCGA TGGTGTGCAG GGCGGCACCG AGCAGGCCGC TACCGACGCC
ATGACCATTG CCCTCTATCA TTTCGGCCTT CACACCTGGA CCATCTTTGC CATGCCGGGC
CTGGCCATTG GCTATTTCTC CTATCGCCAC AGCCTTCCCA TGCGTATCAG CAGCCTGTTC
TACCCGATTC TTGGTGAGCG CACCTTTGGT CCATGGGGCT GGGCGGTGGA CGTTATCGCG
GTGTTGGGCA CGCTGTTCGG GGTGGCGACG TCGCTCGGGC TGGGCACGTT GCAGCTGAAC
AGTGGACTGA ATTACCTGTT CGGTGTTCCT TCCGCGGGCT GGGTTCAGGT TCTGCTGATT
ACGGTTATTG CCAGCATTGC AGCGACCTCG GTAGCGCTAG GTCTGGACAA AGGGGTGCGG
CGGCTGTCCC AGGTGAATAT TCTGCTGGCG ATTGTGTTGC TGCTGTTTGT ATTTGCTCTG
GGCCCTACCG TGTTTATTGC CGAAGGTATG GTTCAGAGCG TGGGTGATTA TTTTGATGCC
TTGCCCTGGC TGGCGTTCTG GACAGAAACC TTTCGCGAGT CGGACTGGCA ACGCAACTGG
ACGTTGTTCT ACTGGGCCTG GACGATTTCC TGGGCGCCCT ATGTGGGTAT TTTCATTGCC
CGGATTTCCC GAGGGCGAAC CATTCGGGAG TTCGTAGCCG GCGTACTGTT TGCGCCAACC
GCGTTTACGC TGGTGTGGTT CGGCATCTTT GGTCTCTCTG CCATCAACGT TGAGATGAAT
GGCCTGGTGG CACTGGCGGA TCAGGTGCAG AGGGATCCGT CGGTGGCCAT CTTTGCATTT
CTTGATGTTT TTCCGCTGGC GGAGGCGGCT TCTGCTCTGA GTGTGGTCAT TATTGTCATT
TTCTTTACCA CGTCATCGGA CTCCGCCTCC CTGGTGATTG ATATGCTGAC ACGCAGGGAC
GACCAGCCTT CGCTGATTCG CCAACGGATT TTCTGGGCGG CGGCCCAAGG GGTAATTGCG
GCCACTCTGT TGCTTGCCGG CGGGCTGGAT GCTCTGCAGA ACGTGATCAC TTCACTTGGT
TTACCGTTCT GTATTCTGCT GGTTTTTATG GCGGTGTCCC TCTATCGCGC CCTGCACGCC
GATTATCGCG GCTACAGTGT GGATGAGCTG GTGCGAGGCC GCGCCTTCCC GGAAGTGGAA
GCCGATTCTG AACCCAAACA GGAGAAAGGT TATGTACCGG AAGTTGCTGA TCGCGATTGA
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| Protein sequence | MLERLQHRLG LQTIPGVFFS SAAIAALFVA LAIPFDQAVA SSFGQLTGWV ARNLGWFYIL
AVSSLLIFLL GLALSRYGSI RLGADDSRPD YSNLTWFTML FAAGIGTILM FWGVAEPVSH
FANPPFDGVQ GGTEQAATDA MTIALYHFGL HTWTIFAMPG LAIGYFSYRH SLPMRISSLF
YPILGERTFG PWGWAVDVIA VLGTLFGVAT SLGLGTLQLN SGLNYLFGVP SAGWVQVLLI
TVIASIAATS VALGLDKGVR RLSQVNILLA IVLLLFVFAL GPTVFIAEGM VQSVGDYFDA
LPWLAFWTET FRESDWQRNW TLFYWAWTIS WAPYVGIFIA RISRGRTIRE FVAGVLFAPT
AFTLVWFGIF GLSAINVEMN GLVALADQVQ RDPSVAIFAF LDVFPLAEAA SALSVVIIVI
FFTTSSDSAS LVIDMLTRRD DQPSLIRQRI FWAAAQGVIA ATLLLAGGLD ALQNVITSLG
LPFCILLVFM AVSLYRALHA DYRGYSVDEL VRGRAFPEVE ADSEPKQEKG YVPEVADRD
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