Gene Maqu_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_3105 
Symbol 
ID4654466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp3448620 
End bp3450137 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content61% 
IMG OID639813085 
Productdeoxyribodipyrimidine photo-lyase 
Protein accessionYP_960366 
Protein GI120556015 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTCG TGGTCTGGTT CAAACGGGAT TTACGGGTGG AGGATCACGG CCCACTTTAC 
GCCGCTGTGC AATCGGGGCA GCCGGTGGTG CCCTTGTACG TGGTGGAGCC GGAATACTGG
CAGCAACCGG ACACCTCCCG CCGGCAGTGG CAGTTCGTTG CGGAGTCTCT CGAATCCTTG
CGCAAGCAGT TAAAACGCCT GGGCAGTGAT CTGCTGATTG CTCACGGGGA GGTCATCAGA
ACCCTGGATG ACCTGAAACA GCAGTACGGC ATCACACAGG TGTTCTGCCA TCAGGAAACC
GGCGGGGACT GGACCTTTCA ACGGGATAAA GCGGTGATTG CCTGGTGCCA GAGCCAGCAG
ATTGAGTTCC GCGAATGGCA GGGCTTTGGT GTCGTTCGGC GACTGGTCAA CCGAGACGAC
TGGGACCAGC ACTGGAACCG GATCATCAAA AGCACACGCC TGCCTGCACC CGAAGGGATT
CGTTCGCCGG ATACCTCCGG CTGGCCGCAG AGCTTACCCG CACCCGCCCA GCTTAACGGT
GGCCCGTGCC CGGATCGTCA GGCCGGCGGC AGCGAACGGG CCATTGCCCT GCTGGATTCG
TTTCTGGAAC GGCGGTGCGT GGGTTATCAG TACAACATGT CCTCACCGCT TACCGCACCT
CGCGCCTGCT CACGGCTCAG CCCTCACCTG GCCTGGGGCA CCATCAGCCT GCGCGATGTC
TATCAGCAGT CAAAAGAGAC CGGAGACCAC CGCAACACGC TGCCCCGCAA GAAGAAAAGC
CTCACCAGCT TTCGCTCAAG GCTGCACTGG CATTGCCACT TTATCCAGAA GCTGGAGGAT
GAACCGGAAC TGGAATTCCG TGCCATGCAT CGGGAACTGG AGCACCTGAA AACCGGACCA
AACAACAGCG AGCGACTGCA TCGCTGGCAG GAGGGCCAGA CCGGCTGGCC GCTGGTGGAT
GCCTGCATGC GCAGCCTGGA GCACACCGGT TGGATCAACT TCCGCATGCG GGCCATGCTG
ATGGCGGTGG CCAGTTATCA GCTATGGCTT CACTGGCGGG ACCCGGCACT GCACCTGGCT
CGACTGTTTA CCGATTTCGA GCCCGGCATT CACTATCCCC AGGCCCAGAT GCAATCAGGG
CTCACCGGCA TCAACGCCCT GCGCATATAC AACCCGGTGT TGCAAAGCCA GAAACTGGAT
CCGGAAGGTG AGTTCATCCG CCGCTGGATA CCGGAGCTGG CCGGCGTCCC GGCGGAGATG
ATCCACACCC CATGGCTGAT GACGCCGGCC CAGAAGCAGC GCTTTGGCGG CAATACCTAT
ATTTCACCAG TCTGTGATCA TGAGCAGGCA GCACGGGTGG CTCGCAAGGC GGTCGGGGAG
TTCAGGAAGC GGCAAGTGAG CCAGACAGAG ACGGACCGGG TTCTTAACCG TCATGGCAGT
CGGAAGGGGC CGACACAGAA CCGGCCCAGG ACTGGCAGCC ATGACTCTGA ACCGGCATCA
CAGCTCCCTC TTTTTTGA
 
Protein sequence
MAVVVWFKRD LRVEDHGPLY AAVQSGQPVV PLYVVEPEYW QQPDTSRRQW QFVAESLESL 
RKQLKRLGSD LLIAHGEVIR TLDDLKQQYG ITQVFCHQET GGDWTFQRDK AVIAWCQSQQ
IEFREWQGFG VVRRLVNRDD WDQHWNRIIK STRLPAPEGI RSPDTSGWPQ SLPAPAQLNG
GPCPDRQAGG SERAIALLDS FLERRCVGYQ YNMSSPLTAP RACSRLSPHL AWGTISLRDV
YQQSKETGDH RNTLPRKKKS LTSFRSRLHW HCHFIQKLED EPELEFRAMH RELEHLKTGP
NNSERLHRWQ EGQTGWPLVD ACMRSLEHTG WINFRMRAML MAVASYQLWL HWRDPALHLA
RLFTDFEPGI HYPQAQMQSG LTGINALRIY NPVLQSQKLD PEGEFIRRWI PELAGVPAEM
IHTPWLMTPA QKQRFGGNTY ISPVCDHEQA ARVARKAVGE FRKRQVSQTE TDRVLNRHGS
RKGPTQNRPR TGSHDSEPAS QLPLF