| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2959 |
|---|
| Symbol | |
|---|
| ID | 4655544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 3294969 |
|---|
| End bp | 3296726 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639812939 |
|---|
| Product | type III restriction enzyme, res subunit |
|---|
| Protein accession | YP_960220 |
|---|
| Protein GI | 120555869 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGGC CTTTCACGCT GCGGCCTTAC CAACAGGAAG CGGTCGACGC CACGCTGAAC
CACTTCCGTA AATCGGATGA ATCTGCGGTC ATTGTGCTGC CGACCGGTGC CGGCAAGAGC
CTGGTAATTG CCGAGCTGGC TCGCCTTGCG CGCCGAAAGA TTCTGGTCCT GACCCATGTG
AAGGAACTGG TGGAGCAGAA TCACGCCAAG TATCAGAGTT ATGGTCTGTC GGGGGGAATC
TTTGCGGCCG GGCTGAAACG CAAGGAGAAC CACCATCAGG TGACCTTTGC CAGCGTGCAG
TCGGTGGCGG CGAATCTGGA CCAGTTCCGG GATGAATACT CGCTGGTTAT TATCGATGAG
TGCCACCGGG TGAGTGGCGA GGAAACCAGC CAGTACCAGC GGATCATCGA GCTTTTACGG
CAGCAGAATG ACTCCCTGAA GGTGCTTGGG CTCACTGCTA CTCCCTACCG CCTGGCCATG
GGATGGATCT ATCGTTACCA CTACCGGGGT TTTGATCGTG GCTCCGATGA CGAGCAGGAC
AAGCCTTTCC GGCACTGCAT CTACGAATTG CCCCTGAGTT ACATGATCAA CCGTGGTTAC
CTCACCCGGC CTGAATTGGT TAACGCGGCT GTGGCCCAAT ACGATTTCTC CGCACTCACG
CAGGACCGCT TTGGCGAATA CGCCGAGAAA GACGTCAACC AGTTGTTGAG CAAACATCAG
CGGGTGACAC GTGCCATCAT CGAACAGGTG ATGGAGATGG CGGCCGAGCG CCAGGGGGTG
ATGATTTTCG CGGCGACAGT GCAGCACGCG CAGGAAATTG CCGGGTATTT GCCTGAGCAG
GAAACCGCCC TGGTGACCGG CGCGACTGAT CTGCGAGATC GCGACCAGCT GATCCAGCGC
TTCAAGCAAC GGCAGTTGAA GTACCTGGTG AATGTGTCTG TGCTGACGAC CGGATTTGAT
GCTCCCCATG TGGACCTGAT CGCCATCTTG CGGCCTACTC AGTCGGTAAG CCTGTATCAG
CAGATTGTCG GCCGAGGCCT GCGGTTGGAT GAGGGGAAAC AGGATTGCCT GGTGATTGAT
TACGCCGGCA ATCATGTCAA CCTGCACCAC CCGGAAGTTG GGGAGCCGAA GCCCAACCCT
GACAGTGAAC CGGTGCAGGT GTTCTGCCCG GGCTGCGGTT TTGCCAACAT CTTCTGGGGC
AAAACCGACA GCGACGGTCG TGTCGTTGAG CACTATGGCC GTCGGTGCCA GGGCCTGCTG
GAATCCATAG AAGACGACGC TGGGCGGCCA CAGCAATGCG ACTACCGGTT CCGGTTCAAG
GAATGTCCAC ATTGCGGTGG CGAGAACGAC ATCGCTGCCC GCAACTGCGG CCACTGTCAC
CAGGCGATTA TCGATCCGGA TGATCAGCTG CGGGATGCCC TGAAGCTCAA GGATGCCATG
GTCATCCGCT GTGCCGGCAT TTCTCTGGCG GGAGAAGGCC AGAAACTTCG GATGACCTAC
CACGGAGAAG ACGGGGAGGA ACTCCGGGAG TCTTTCGATT TCAGCAAGCC AGGCCAGCGC
GCCGTGTTCA ACAAGCTGTT TGGCCGACGG TTTGCCAATG GCCAGGCTCC GAAAGTCTTT
GCCCGGGCAA ATGAGGTGCT GGAGATGCAG GTGCTGTTAC CCGTGCCGGA TTTCGTGATT
GCTCGCAAGC AGAAGCAATA CTGGCAAGTG CAGGAGCGAA TCTTCGATTA TCGGGGGCAG
TATCGTAAGG CCTATTGA
|
|---|
| Protein sequence | MNGPFTLRPY QQEAVDATLN HFRKSDESAV IVLPTGAGKS LVIAELARLA RRKILVLTHV
KELVEQNHAK YQSYGLSGGI FAAGLKRKEN HHQVTFASVQ SVAANLDQFR DEYSLVIIDE
CHRVSGEETS QYQRIIELLR QQNDSLKVLG LTATPYRLAM GWIYRYHYRG FDRGSDDEQD
KPFRHCIYEL PLSYMINRGY LTRPELVNAA VAQYDFSALT QDRFGEYAEK DVNQLLSKHQ
RVTRAIIEQV MEMAAERQGV MIFAATVQHA QEIAGYLPEQ ETALVTGATD LRDRDQLIQR
FKQRQLKYLV NVSVLTTGFD APHVDLIAIL RPTQSVSLYQ QIVGRGLRLD EGKQDCLVID
YAGNHVNLHH PEVGEPKPNP DSEPVQVFCP GCGFANIFWG KTDSDGRVVE HYGRRCQGLL
ESIEDDAGRP QQCDYRFRFK ECPHCGGEND IAARNCGHCH QAIIDPDDQL RDALKLKDAM
VIRCAGISLA GEGQKLRMTY HGEDGEELRE SFDFSKPGQR AVFNKLFGRR FANGQAPKVF
ARANEVLEMQ VLLPVPDFVI ARKQKQYWQV QERIFDYRGQ YRKAY
|
|---|
| |