| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2908 |
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| Symbol | |
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| ID | 4655082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 3248258 |
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| End bp | 3248950 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639812888 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_960169 |
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| Protein GI | 120555818 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.114904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCT TACGGATACT CACCAATCAG AACGGTATTA GCCGCCGACA GGCCAAGGCC
CTGCTCGCCG CCGGCCGTGT TCATGTTGAT GGCGAGCGCT GCCATGATCC GGACCTTGAC
ATCCCGCGGT TTCGTGAAGT GTGCGTTGAC CAGCGAATCA TCCAGAGCGC GGCCCCTTCG
TATTACCTGA TGCTGAATAA ACCATCGGGC TATCTGAGCG CCACCCGGGA TGACCAGCAT
CCCACCGTTA TGGAACTGAT TGACCCATTG CTTCGGCCGC ATGTGCACAT CGCAGGGCGA
CTGGACAGGG CAAGCACCGG ACTATTGATC CTCACCAGTG ACGGGGTCTG GAGCCGACGG
CTGACCGAAC CGGCGGTTAA AATCCCCAAG GTATACCGGG TAACCACGGC TTACGCCATC
TCACCGGAGA CAGAGGATCG GTTCAGGGAA GGCATCTGGT TCGAGTACGA ACAACTCAGA
ACCTCGCCCG CGTCGCTGGA GCCATTAGGA GAGCGGGAAG TGCGGCTGAC GATCTACGAG
GGTCGCTATC ATCAGGTAAA ACGCATGTTT CACGCCGTGG GCAACCGGGT GACCTCATTG
CACAGGGAAA GCATGGGCGG GCTGACGGTG GATGGGCTAG AGCCTGGCAG CTACCGCCAT
CTCAGCGCAC AAGAGGTCAG CTCAATCGGC TGA
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| Protein sequence | MKLLRILTNQ NGISRRQAKA LLAAGRVHVD GERCHDPDLD IPRFREVCVD QRIIQSAAPS
YYLMLNKPSG YLSATRDDQH PTVMELIDPL LRPHVHIAGR LDRASTGLLI LTSDGVWSRR
LTEPAVKIPK VYRVTTAYAI SPETEDRFRE GIWFEYEQLR TSPASLEPLG EREVRLTIYE
GRYHQVKRMF HAVGNRVTSL HRESMGGLTV DGLEPGSYRH LSAQEVSSIG
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