| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2793 |
|---|
| Symbol | |
|---|
| ID | 4656365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 3124990 |
|---|
| End bp | 3126756 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639812774 |
|---|
| Product | TrkA domain-containing protein |
|---|
| Protein accession | YP_960055 |
|---|
| Protein GI | 120555704 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGC AAGGATGGTT TTCCCTGGGG TTGGCGCTTA CCGCCCTGCT ATTGATGAGT
TCAGGCCGCT TTGCACCGCA TCTGGTGATG ATGGCGGTGC TTGTGGTGCT CAGTGCCAGT
GGCATCATCT CCGCCGATCA GGCGCTGGCC GGATTCAGTA ACAGCGGCTT GATCACCGTG
GTGGCTATGT TTGTGGTGGC CGCAGGCATT CATCATTCCG GCGGCGTCGA TCTGCTGGTT
AACCATCTGC TTCGCAATCC CAAATCGGTC CGTTCCGCGC AGGCTCGCAT AGCTCTGCCG
GTTTCCCTGC TGAGTGGCTT CCTCAACAAT ACACCGGTGG TTGCCACCAT GATTCCCGCC
GTCCATGCCT GGTCCCGGAA GATCGGTATT TCACCCTCCA AGTTGATGAT TCCGCTGAGT
TACTCAGCGA TTCTGGGCGG CACACTGACA CTGATTGGCA CCAGCACCAA TCTGGTTGTT
AATGGTCAGT ATCAGCAACT GACCGGTGAG GCCGGGTTCT CGATCTTTTC CATTACGGCG
GTTGGTTTAC CGGTGGCCAT TATCGGTCTG GCGGTCATGC TTCTGGTCAT GCCGCGGGTG
CTGCCAGACC GTAAGGATCA GCAGAAGTTT GGCTCCATGA GGGAGTTCAC GCTGGAAGTG
GCGGTGTCCT TTGAAGGTCC GCTGGTGGGC CGGACCGTGG GTGAAGCCGG CTTACGGGAA
CTGGAGCGAT TGTATCTGGT GGAAATCGAG CGGGATGGCA GTGTGGTCAC TGCCGTCCCC
TCGGAAGAAC GGCTGCGTGG CGGTGATCGG CTGGTGTTTG CGGGCGATAC CCAGGCGATC
TCAGACCTGT TGCGCATCAA TGGCATCGTG CCGTCGGTGC ACGACGATGA GCCCAGCCTC
AGTCAGGATC GTGCCGAGCG GCGGTTGGTG GAAGCCGCTT TGTCTCCGCA ATCGGATGTG
CTGGGCCTGA CCATCCGGGA CGCAAGGTTC CGGGACCGTT ACGGCGCCGT GGTGCTGGCG
GTGGCCCGGG GCGGCGAGCG TGTGTCAGGC AACCTCGGCA ACATTCGCCT GAAACCCGGC
GATGTCCTGC TGCTGGAGGC GCGTCCGGCC TTCGTCAGCC GTCAGCGCTA CAACAAGGAT
TTTCTGCTCA TCAACGACCT GGAAACGGAA ACGCCCCGAC ATGACCGGGC CTGGCTTTCC
TGGGGTATCC TGCTTGTGTT GGTGAGCCTG GCGGCCTGCG GGGTGATGAG TATGCTCAAC
GCCGCCTTAC TGGGAGCCGC TCTGATGATC CTGTCCGGCT GCTGCTCGGT GGGGCAGGCT
CAGAAATCGG TGGATGTGCC GGTCATCCTC ACCATCGCAG CGTCCTTTGC GCTGGGAGCG
GCATTGGAGG AAACCGGAGC AGCGGCGTTT ATGGCCGAGG GTATTCTGGC TTTCAGTGCA
GGCCAGGTGC TGCTAACACT GTTTCTCGTA TACTGCGCTG TGTCGTTTCT GACCGAGGTC
ATCACGAACA ATGCCGCAGC TGTACTGGTG ATTCCGGTTG TGCTGTCGAT GACCGGGAGC
ATGGGGGTGC CTGCAGAACC CTTTGTTATT GCAGTGATGA TGGCAGCCTC CGCCAGCTTC
GCCACGCCAT TGGGGTATCA GACCAATATG ATGGTGTTTG GTCCTGGTGG CTACCGGTTT
TCCGATTTCG TGAAAGTGGG GTTGCCCATG AATGTGCTGG TGGGGTTGGT AACGGTCGCG
GTGATTGCGG TGGTTTACGG GTTGTGA
|
|---|
| Protein sequence | MDWQGWFSLG LALTALLLMS SGRFAPHLVM MAVLVVLSAS GIISADQALA GFSNSGLITV
VAMFVVAAGI HHSGGVDLLV NHLLRNPKSV RSAQARIALP VSLLSGFLNN TPVVATMIPA
VHAWSRKIGI SPSKLMIPLS YSAILGGTLT LIGTSTNLVV NGQYQQLTGE AGFSIFSITA
VGLPVAIIGL AVMLLVMPRV LPDRKDQQKF GSMREFTLEV AVSFEGPLVG RTVGEAGLRE
LERLYLVEIE RDGSVVTAVP SEERLRGGDR LVFAGDTQAI SDLLRINGIV PSVHDDEPSL
SQDRAERRLV EAALSPQSDV LGLTIRDARF RDRYGAVVLA VARGGERVSG NLGNIRLKPG
DVLLLEARPA FVSRQRYNKD FLLINDLETE TPRHDRAWLS WGILLVLVSL AACGVMSMLN
AALLGAALMI LSGCCSVGQA QKSVDVPVIL TIAASFALGA ALEETGAAAF MAEGILAFSA
GQVLLTLFLV YCAVSFLTEV ITNNAAAVLV IPVVLSMTGS MGVPAEPFVI AVMMAASASF
ATPLGYQTNM MVFGPGGYRF SDFVKVGLPM NVLVGLVTVA VIAVVYGL
|
|---|
| |