Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_2715 |
Symbol | |
ID | 4655413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 3038091 |
End bp | 3039626 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639812696 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_959977 |
Protein GI | 120555626 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTATGA AAGCCTCATT ACAGCTTAAG CTGGGCCAGA GTCTGACCAT GACGCCCCAG CTGCAGCAGG CCATACGCCT GCTACAGCTT TCTACCCTCG ATCTCCAGCA GGAAATCCAG CAGGCGCTGG AGTCCAACCC CATGCTGGAA ACCTCAGAGG ACGATGAGCA CCCTGAAGGC GACGAGCGCG AAGAGCACGA GCACAGTGAA GCTTCCAGCT CTGAGGCCAA CCAGGACGAC AGCCACCAGG ACGCGAGCCC GGACTGGGAC GAAACCGAGA ACGGCCCGGA CTGGTCGTCC GAGAACGATA TTCCGGACAA CATTCCCGAT GATCTGCCAG TGGATACCGC CTGGGACGAC ATCTACCAGT CTGCCCCGGC TCCGGCCAGC AAAGGCGAAG ACGAGCACGA ATCGGATTTC GAAACCCGGA ACTCGCCTAC CGAAACCCTG CAGGATCACC TTGAGTGGCA GCTGAACCTG ACGCCTCTGA GCGAGCGGGA TCAGGCCATT GCCCACGCGC TGCTGGATGC TGTGGATGAG CGCGGCTACC TGACGTCTGA CATTGAGGAC ATTCACGCAG GCCTGCTGGA CGAAACCGAA GAAGACCCGT TGGAACTGGA CGAAGTGGAA GCGGTACTCC ACCGCCTGCA ACACTTCGAC CCGCCAGGCG TGTTCGCTCG GGATCTCCAG GAATGCCTGC TGATTCAGCT CAACCAGCTG CCACCGGATA CCCCCTGGCT GCGCCAGGCG AGACTGGTGG TTACCCAGTT CCTGCATCTG CTTGGCAACC GGGACTACGC ACAGCTGTTG CGCCGCAGCC GGCTCAAGGA AGACCAGCTG AAACAGGTAC TGGCCCTGAT CACGAGCCTG AACCCGCGCC CTGGCGATGT CGTGGACCGG GCCGAACCGG ATTACGTTAT CCCGGACGTT ATCGTACGCA AACACGAAGG CCGATGGCGG GTTGAACTCA ACCCGGAAAT CGCTCCGCGT ATCCGGGTGA ATGCCAGCTA CGCGTCACTG ATCCGCCGGG CTGACAGCAG TGCCGATAAC ACCTACCTGC GCGACCAGCT GCAAGAAGCG AAATGGTTTA TCAAGAGCCT GCAAAGCCGG AATGAAACCC TGCTGAAAGT GGCCACCCGC ATCGTTGAAC ACCAGCAAGG GTTCCTGGAT CAGGGGGAAG AAGCAATGAA GCCTCTGATC CTGTCTGACA TTGCCCAGGC GGTGGAAATG CACGAGTCCA CGATTTCCCG GGTTACCACC CAGAAGTACA TGCACACGCC CCGCGGTATT TTCGAGCTGA AGTACTTTTT CTCCAGCCAC GTCAGCACCG CCGAGGGCGG CGAATGCTCT TCTACAGCCA TCCGGGCGAT GATCAAGAAG CTGATTGCCG AGGAAACCCC GAAAAAGCCA TTGAGCGATA GCAAAATTGC AGCCATGCTA GGGGAACAGG GAATCAACGT GGCGCGGCGT ACCGTGGCCA AATACCGGGA GGCGATGCAT ATCCCTCCCT CGAACGAACG AAAACGCCTG GTTTAA
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Protein sequence | MVMKASLQLK LGQSLTMTPQ LQQAIRLLQL STLDLQQEIQ QALESNPMLE TSEDDEHPEG DEREEHEHSE ASSSEANQDD SHQDASPDWD ETENGPDWSS ENDIPDNIPD DLPVDTAWDD IYQSAPAPAS KGEDEHESDF ETRNSPTETL QDHLEWQLNL TPLSERDQAI AHALLDAVDE RGYLTSDIED IHAGLLDETE EDPLELDEVE AVLHRLQHFD PPGVFARDLQ ECLLIQLNQL PPDTPWLRQA RLVVTQFLHL LGNRDYAQLL RRSRLKEDQL KQVLALITSL NPRPGDVVDR AEPDYVIPDV IVRKHEGRWR VELNPEIAPR IRVNASYASL IRRADSSADN TYLRDQLQEA KWFIKSLQSR NETLLKVATR IVEHQQGFLD QGEEAMKPLI LSDIAQAVEM HESTISRVTT QKYMHTPRGI FELKYFFSSH VSTAEGGECS STAIRAMIKK LIAEETPKKP LSDSKIAAML GEQGINVARR TVAKYREAMH IPPSNERKRL V
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