| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2648 |
|---|
| Symbol | |
|---|
| ID | 4654460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2977862 |
|---|
| End bp | 2979601 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639812629 |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_959910 |
|---|
| Protein GI | 120555559 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0969268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTAT CTCAACCCTG GAAACCACTT GGCGCCTGGC TGGTCGAATT GGGTGCTGTT
TCTCAAAAAG AGCTTAATCA GGCGCTGGAG GTTCAGAAGC AGATCGGTGG GCTGCTCGGC
ACTCTACTGG TGCGTTCCGG GGCCACCAGT GAAGACGTAG TCTTGCAAGC GCTCTCGGCG
CAGTGGGCTT ATCCGCTGTT GGGCAAGCAG CAACCTGCGC CAGACGACTT TCAGGTATAT
GAAACGCTAC GGGAATTGCC CGTCAGTATG GAATGGATGC TGGAGCAGGA TACCGTTGCC
TGGTTTGAAG AAGCTCTCTC TGAGTCGGCA GATCAGCCGG AACAAAGAAC AGTCTGTATT
CTCTCTTCCA GCTTTCAAAA CGACGAAATC CGGGAAGTGC TCGAAACCTC TCTTGAGTCC
AGGGGCTTCA GGCTCAAGTG GGTGCTTGCC TCCACCTATG AAATTGAGCG GTTGGTGGGT
TTTGTCCGCC AGGAACTCGC AGTCACCAGG TTGTTCAGTG ATACTGGCAG CCAGAGTCTG
CTTGAGCTGG CAGAGGAAGC CCCGGTCGTG GAACTGGTCA ACAACGTACT TGCCAAAGCG
GTTGAGGCAG GCGCGTCAGA TGTCCATATC GAGCCCGGTG AGGAATTCTT CATCATCCGC
TATCGGGTCG ATGGCGTGCT GCATTCCCAG ATGACTCAAT CGGCCAGCCG TTTCCCCGCC
GTTGCCTCAC GCATAAAGCT TATCAGCGGC ATGGACATTG CCGAATCCCG GCTGCCCCAG
GACGGCCGGA TCAGTACGCG ACTTGGCGGG CAGGAAATGG ATATCCGGGT ATCCACCGCC
CCTTGCTCCT TCGGCGAATC TGTGGTCATG CGTTTGCTGC CCAAAAACCG GGAATCTTTG
TCATTGGAAA GCCTGGGCAT GGAGCCGGAC CACCTCAAGC TGATGCGGTC GGTGCTGGGC
TTCTCTAACG GTATTGTCCT GGTTACGGGG CCAACAGGTT CAGGTAAATC GACAACCCTG
TATAGTGGTT TGTCAGAACT GGTGGACGGG CGTCAGAAGC TGATTACCGT TGAAGATCCT
GTTGAATTCC AGGTTCGGGG CGTAACCCAG ATCCAGGCCA ATGGTGATAT CGGCTACACC
TTCGCAAGAG CGTTGAGAGC TATACTGCGC CAAGACCCGG ATATCATCAT GATTGGTGAA
ATACGGGATC TCGAAACCGC AGAGATTGCC ATACAGTCGG CGCTTACGGG CCATCTGGTG
CTGTCCACCC TACACACCAA TGATGCCCTT TCGGCATTTA CCCGGCTTGT GGATATGGGG
GTAGAGCCCT ACCTGGTTGC CGCGCCGGTC AAAGCAGTAC AGGCGCAGCG GCTCGTGCGC
AGGGCATGTC CCAACTGCAG TGAGCCGGCC AGTCCTCCGG AGTCGCTCTG GAAACCGCTC
GCCGGAGACT GGATCAAAAA TCCGGCTTTT GTTGAGCCCA AAGGTTGCGA ACGCTGTCAT
GGTACCGGGT ACAGGGGCAG GTTAGGTATT TATGAAATCA TTCCGGCCAC CGAAGAGCTG
CAAACCCTGG TTGCAGACAA CGCCGATATC AGCGATTTGC GTCTGTGGGC GGCGCGCCAC
GGCCATCGCA ATCTGTTGCA GGACGGCCTG ATCAAAGCCG CCCGTGGTGA GACTACCATA
GAGGAAGTTA TGCGAGTGGC CGGCACCAGT GTGGCTGAAG ATGAGGCCTC TGAGGCATGA
|
|---|
| Protein sequence | MAVSQPWKPL GAWLVELGAV SQKELNQALE VQKQIGGLLG TLLVRSGATS EDVVLQALSA
QWAYPLLGKQ QPAPDDFQVY ETLRELPVSM EWMLEQDTVA WFEEALSESA DQPEQRTVCI
LSSSFQNDEI REVLETSLES RGFRLKWVLA STYEIERLVG FVRQELAVTR LFSDTGSQSL
LELAEEAPVV ELVNNVLAKA VEAGASDVHI EPGEEFFIIR YRVDGVLHSQ MTQSASRFPA
VASRIKLISG MDIAESRLPQ DGRISTRLGG QEMDIRVSTA PCSFGESVVM RLLPKNRESL
SLESLGMEPD HLKLMRSVLG FSNGIVLVTG PTGSGKSTTL YSGLSELVDG RQKLITVEDP
VEFQVRGVTQ IQANGDIGYT FARALRAILR QDPDIIMIGE IRDLETAEIA IQSALTGHLV
LSTLHTNDAL SAFTRLVDMG VEPYLVAAPV KAVQAQRLVR RACPNCSEPA SPPESLWKPL
AGDWIKNPAF VEPKGCERCH GTGYRGRLGI YEIIPATEEL QTLVADNADI SDLRLWAARH
GHRNLLQDGL IKAARGETTI EEVMRVAGTS VAEDEASEA
|
|---|
| |