Gene Maqu_2628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_2628 
Symbol 
ID4655197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand- 
Start bp2958916 
End bp2959476 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content56% 
IMG OID639812609 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_959890 
Protein GI120555539 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0839313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTG TGGAAACCCC GCTGGAAGGG GTGCTGATTC TGGAACCCAG GGTGTTCGGC 
GATGACCGGG GCTGGTTCTA CGAGAGTTTT AATGCCGAGC GCTTTGCCGA TGCTGTTGGT 
AAGCCTGTTG CATTTGTTCA GGATAATCAT TCCCGCTCCG CCAAAGGTGT GCTTAGGGGA 
ATTCATTTCC AGACCGGTCG TGCGGCCCAG GGCAAATTGG TGCGCGCAAC GTTTGGTGAG 
GTGTTCGATA TCGCCGTGGA TCTGCGCAAA AGTTCGCCTA CGTTCGGGCA GTGGACCGGG 
GTGCTTTTGA GTGCGGAAAA CAAACGGCAG TTGTGGGTTC CCGCCGGTTT CGGGCATGCC 
TTTCTGGTAA CCAGTGATGT CGCGGAAGTG CAATACAAGG TCGATGCCTA TTGGTCTGCT 
GAGCACGAGC GCAGCCTTCG CTGGGATGAC CCTGCGGTGG CCGTTGAGTG GCCGGAGGTA 
GGCGAGGTGC AGCTGTCCGA GAAAGACCGA CATGCGCCAG ACCTGAACGT TTTGAATGCA 
GAGGGTGATT TGTTTGAGTA A
 
Protein sequence
MNVVETPLEG VLILEPRVFG DDRGWFYESF NAERFADAVG KPVAFVQDNH SRSAKGVLRG 
IHFQTGRAAQ GKLVRATFGE VFDIAVDLRK SSPTFGQWTG VLLSAENKRQ LWVPAGFGHA 
FLVTSDVAEV QYKVDAYWSA EHERSLRWDD PAVAVEWPEV GEVQLSEKDR HAPDLNVLNA 
EGDLFE