| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2612 |
|---|
| Symbol | |
|---|
| ID | 4654624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2938779 |
|---|
| End bp | 2939339 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639812593 |
|---|
| Product | sugar transferase |
|---|
| Protein accession | YP_959874 |
|---|
| Protein GI | 120555523 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00297652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTCGCT CGTTTGATGT GTTTTTCTCG TTGCTGGGAT TAGTACTTGG GCTACCTGTG
TTGCTGATCC TTTGGATAAT CGGCCTAATC GATACAGGCT CTCCCATTTT CCAGCAACAG
CGGGTTGGAC GGAACCAAAA ACCATTTACA CTCGTCAAGT TTCGGACAAT GAAAGTGGAC
ACTGCTTCGG TAGCAAGCCA TCTGGCCAGT GCAGATGCCA TCACGCCATT TGGTCACTTT
CTGCGCAGAA CCAAGCTTGA TGAATTGCCC CAGCTTTGGA ATGTGCTCAA GGGAGAAATG
AGTCTTGTGG GCCCGAGGCC GTGTTTGTTT AATCAGCAAG AACTGATTTC AGAGCGGGAC
AGTCTTGGGG TTTATGCTGC CCGGCCGGGG ATCACCGGAT TGGCTCAGGT TAACGGGATT
GACATGTCGG CTCCAAAATT GCTCGCGGAG ACCGACAGTA AGATGTTGGA AAGTCTGACG
ATATCCTCTT ACTTCAAATA TATATTTATG ACGATTGCAG GAAAGGGTGC GGGTGATCGA
GTGTCCGGTA CTAAGGAATA G
|
|---|
| Protein sequence | MIRSFDVFFS LLGLVLGLPV LLILWIIGLI DTGSPIFQQQ RVGRNQKPFT LVKFRTMKVD
TASVASHLAS ADAITPFGHF LRRTKLDELP QLWNVLKGEM SLVGPRPCLF NQQELISERD
SLGVYAARPG ITGLAQVNGI DMSAPKLLAE TDSKMLESLT ISSYFKYIFM TIAGKGAGDR
VSGTKE
|
|---|
| |