| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2611 |
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| Symbol | |
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| ID | 4654623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 2936761 |
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| End bp | 2938722 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639812592 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_959873 |
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| Protein GI | 120555522 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.116735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAATA GTCTGATTAA TGGAATTCTG CGTTTGTCGC GTCCTCAAAA GCGAGCAATT
TCGGTAGTCA CTGATTTTGT GCTGCTCTCG CTCGCAATTT GGGGTGCTTT CGCATTGCGT
TTTGAGAATG CAACCTGGTT CCCATCAGAT AAACAGCTAT GGGTGTCTTT GGCTACTGTA
GTGGTCACCA TTGGTGCGTT TGTTAAGCTT GGCCTTTATA GAGCAGTGAT TCGTTACATC
AGCGAACACG CCTTTCTGGC CATTCTGGTT GGTGTTGTTT TCTCTAGTGT AACGCTCATT
GTTCTGGGCT TTCTCTTTCA GACGATGGTT CCCCGTTCCG TGCCTGTTAT ATATGGCGCA
TTTGCGTTTG TGTTGGTTGC AGGGACACGT TTTGGTGTTC GAACCATGGT GAGGCGCCGA
ACTTATCGAT CTAAAGATGG GGTTTTGATT GTTGGGGCCG GCCCAAAGGG TATGCAATTG
GCGTCCGCTC TGGCGCAGGG AGTTGAATAC CGGCCACTTG GCTTTGTGTC CATGGTTGAG
GCCAACCATA AGTCCATGAT TGGCAGTTTG CCCGTTTATG CCCTGAATTT TATTGATAAG
GCGATTAGAG AGTTAGGCGC GTCTCGTGTG CTGATGGCGA TCGAGGATTC CGAGCCTGTA
AATCGCAAAG AACTCATGCG GATTCTTGAG GGGCTTTCTG TACCGGTTCA AACGGTACCT
TCCATGTCAG AGCTCGTTGC CGGTGTTGCC CGAATCAATG ACATTCGAGA TCTGGAAATT
GAGGATCTTT TGGGGCGCGA CCCTGTGCGG CCCGATACAG CAATGGTTTC TCAGAGCTTG
TTTGGTAAAT CTGTATTGGT AACCGGCGCG GGCGGCTCTA TTGGTTCCGA ACTTTGCCGG
CAGATTCTTC GGCATAAGCC GTCGAAACTG GTGTTGTTCG AGCAGTCGGA GTTTTCACTG
TATGCCATCG AAAGGGAGCT CCAATCTATC AACCAGATTG AAGCTTTGGG GGTATCACTG
CATGCAGTAC TTGGTAGCGT AATACATCGT CGTCGTTGTG AGACGGTCAT GCGCGCGTTT
GGCGTTCAGG CGGTATACCA CGCGGCAGCG TACAAGCATG TTCCGCTGGT AGAGCACAAT
GTTATAGAGG GAGTTCAGAA CAACGTATTT GGCACCTTCC ACGCTGCAGA GGCTGCGATT
GCAACCGGAG TGGAGCGCTT TGTACTGATT TCCACCGACA AGGCTGTTCG ACCTACTAAC
ATTATGGGTG CGTCTAAGCG CATGGCTGAG TTAGTACTGC AGGGTTTGGC TCAGCGTCAG
AGTGATACAG TCTTTTCGAT GGTGCGGTTT GGAAATGTAC TGGGCTCGTC AGGCTCTGTT
GTCCCTTTGT TTCGTGACCA GATTCGTGAC GGCGGCCCGG TAACGGTGAC CCATCAGGAT
ATTATCCGCT ACTTCATGAC CATTCCTGAG GCCAGTCAAC TGGTTCTTCA GGCCGGCAGT
ATGGGTCAGG GTGGTGAGGT CTTTGTACTG GACATGGGAG AGCCTGTCAG GATTGCCGAC
CTTGCGCGTA AGATGATTCA TCTGATGGGG TTAGAAGAGC GAACGGAAGA CAATCCGGAT
GGGGATATTG AGATCGTATA CACTGGGTTG CGGCCAGGAG AAAAGCTTTA CGAAGAGCTT
CTGATTGGGG ATAACCCTCA GGGTACAGCA CACCCAAGAA TTATGATGGC GCGAGAGGTA
TCCCTGGAGT GGAATGAAGT GGAAGAGCTT CTCGGCAAGC TTACTAGAGC CAGCCAGGCG
TTCGATTGTG GTGCTGTTAT TCACCTTCTT CAGGAGGCTC GCACAGGATA TGCTCCAAAC
GGGGAGGTGG CAGATCTTGT GTGGTGTAGT GGCAACAACA ATATTGGTGA AAAGTTTGAC
TCCAAGGTAT TGAGCTTCGG GAGCGGATTC TCAGACCTTT AA
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| Protein sequence | MRNSLINGIL RLSRPQKRAI SVVTDFVLLS LAIWGAFALR FENATWFPSD KQLWVSLATV
VVTIGAFVKL GLYRAVIRYI SEHAFLAILV GVVFSSVTLI VLGFLFQTMV PRSVPVIYGA
FAFVLVAGTR FGVRTMVRRR TYRSKDGVLI VGAGPKGMQL ASALAQGVEY RPLGFVSMVE
ANHKSMIGSL PVYALNFIDK AIRELGASRV LMAIEDSEPV NRKELMRILE GLSVPVQTVP
SMSELVAGVA RINDIRDLEI EDLLGRDPVR PDTAMVSQSL FGKSVLVTGA GGSIGSELCR
QILRHKPSKL VLFEQSEFSL YAIERELQSI NQIEALGVSL HAVLGSVIHR RRCETVMRAF
GVQAVYHAAA YKHVPLVEHN VIEGVQNNVF GTFHAAEAAI ATGVERFVLI STDKAVRPTN
IMGASKRMAE LVLQGLAQRQ SDTVFSMVRF GNVLGSSGSV VPLFRDQIRD GGPVTVTHQD
IIRYFMTIPE ASQLVLQAGS MGQGGEVFVL DMGEPVRIAD LARKMIHLMG LEERTEDNPD
GDIEIVYTGL RPGEKLYEEL LIGDNPQGTA HPRIMMAREV SLEWNEVEEL LGKLTRASQA
FDCGAVIHLL QEARTGYAPN GEVADLVWCS GNNNIGEKFD SKVLSFGSGF SDL
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